Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0622 |
Symbol | |
ID | 2687078 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 658850 |
End bp | 660349 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637125289 |
Product | hypothetical protein |
Protein accession | NP_951680 |
Protein GI | 39995729 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.130503 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGGCAT CGCCGCTGCC GCACAAGCGC ATCCTGCTCG TCTTTTTTCT TCTGGTGACC GTGACGGTCT ACGGGAACAC CTTTTTCAAC CAGTGGACCT ATGACGATAT CCCCGTTGTC CTGAAGAATC CCGATGCCCA CTCGCTTGCC GGTTTTGCCC GGAACACGAT GCCCGGCCGC CCCATACGCG AGCTCACCTA CATCCCCGAC CATCTCCTGT TCGGCGACCA GCCCGCCGGC TATCGCATCC AGCAGCTGGC CTGGCACGGA GTGAACGGAC TGTTGCTGGT CGCCCTTTTC CACGCCCTGG GGGTAGAGCT TCCCTTTGCC CTCATGGGGG CGCTCCTCTT CCTGGTGCAT CCCCTCCAGT CCGAGTCGGT GGCCGGCATC GCGCACCGCA AGGAGTTGCT GGCCCTGTTC TTTGCCCTCG GTGCCGTGCT CTGTTTCGTG GGGAGTTTCG CCGCCGCCGG GGGGCGGCGC CTTGCCTTGT GGCTCGCTGC TCTTGCCGCG TACGGTGGCG CACTCCTTGC CAATGAGGCC ACGGTGACGC TGCCGCTCGT GGCTCTCCTC TACGAATGGC TGATGGTTGA ACCAAGAAAA AGGGTGCTGC TCAGGCGTCC CCTCGTGACA CTTCTCTTCC TCGTGGCGGC CGGTGCGGCG CTCATGTACC GGTTCCGGGG GCTCCTGGCA CCTGAACATC TGCTCACGGT CTATTCCAAG AACAGCTTTG GTGCTTCGGA GAACTATCTT CCCCTCTTCA TGGGTGCCAT GAAGGCCTTC GGATTCTATC TCTCCAAGAT CGTTCTCCCG GTCCGCCTAG CCCCCGAGTA TGTATTCCGA CTCTCCGAAA GCCTCTGGCA ACCGTGGGCG TTGCTGTCGC TCGGGCTCCT TGCGTCAGTG GCAAGCGCGA CGGTCTTTCT CCGTCGCCGG CTTCCCCTGG TATCGTTCGG TATCGGCTGG TTCCTCATTT TCTGGCTGCC GGTTTCCAAC CTGGTTCCCG TGGCCTACCT GGCGGCGGAC CGGTACATGT ACCTCTGCCT TCCCGGCGTT GGGCTCGTCC TGGCGGGGTG CCTCCAACGC TGGCCCCACC GGAGATTTGT CGGCGCCTCC TGCCTCGTGA TTGTTGTGTT CGCCGGGCTC ACCGTGATAC AAAACGGGTA CTGGCGCAGC GAACATACCC TCTGGCGGCA TGCAGTCACG GTCAATCCCG ACTCTACCTG GGTGCGCGAG ACGGTGGGGC TGAGTTACCT GCTGACGGGG GATTACAACC AGGCGGCGGC GCATGCGCGG GAGGCGCTAC GGATCGACCG GTTCAATATC CGGGCGTACC TGACCCTGGC CAAGGCCGAG GAACGGCGCG GCAATCTGGC CGAGGCGGTG CTCAATTACG AGATGTTCGC CATGTTCGGC GCCATGGAGT ACCCGGACGA AGCCGCCGAG GTCAGGCTCT ATCTGCCTGT CCTGCGGCAG CGTCAGGCAG TGCAGAAGCA ACATCAGTGA
|
Protein sequence | MTASPLPHKR ILLVFFLLVT VTVYGNTFFN QWTYDDIPVV LKNPDAHSLA GFARNTMPGR PIRELTYIPD HLLFGDQPAG YRIQQLAWHG VNGLLLVALF HALGVELPFA LMGALLFLVH PLQSESVAGI AHRKELLALF FALGAVLCFV GSFAAAGGRR LALWLAALAA YGGALLANEA TVTLPLVALL YEWLMVEPRK RVLLRRPLVT LLFLVAAGAA LMYRFRGLLA PEHLLTVYSK NSFGASENYL PLFMGAMKAF GFYLSKIVLP VRLAPEYVFR LSESLWQPWA LLSLGLLASV ASATVFLRRR LPLVSFGIGW FLIFWLPVSN LVPVAYLAAD RYMYLCLPGV GLVLAGCLQR WPHRRFVGAS CLVIVVFAGL TVIQNGYWRS EHTLWRHAVT VNPDSTWVRE TVGLSYLLTG DYNQAAAHAR EALRIDRFNI RAYLTLAKAE ERRGNLAEAV LNYEMFAMFG AMEYPDEAAE VRLYLPVLRQ RQAVQKQHQ
|
| |