| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0605 |
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| Symbol | |
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| ID | 2687129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 639288 |
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| End bp | 640760 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637125272 |
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| Product | thiamine-phosphate pyrophosphorylase/phosphomethylpyrimidine kinase |
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| Protein accession | NP_951663 |
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| Protein GI | 39995712 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[COG0352] Thiamine monophosphate synthase |
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| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase
[TIGR00693] thiamine-phosphate pyrophosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCTCTA ACGGTCACAC GCTTCGGCTC GTCATAAACC GGGACAAGCA CGACTCGGTC
ATCCGGGGGC TCTACCTGGT GACCGATCAC GACGACAACC TCATCCCGCG GGTTGAGGCG
GCCATCGACG GCGGCGCCCG AGTGGTCCAG TACCGCAACA AGAATCAGGA CCGGGAGAGC
CGGCTCGCCC TCGGCCTGGA GCTGCGGGAG CTGTGCCGCA GGCGGAGCAT CCCCTTCATC
GTGAACGACG ACCTGGAGAT GGCCGTGAGC CTCAAGGCCG ACGGGCTTCA CCTGGGCCAG
GGTGACGGCG ATCCCCGCGA AGCGCGACGC GTTCTCGGCC CCGGCAAGAT CATCGGCGTG
TCCACCCACA CCCTGAGCGA AGCCTTGGAG GCCCAGGCGG CCGGGGTGGA CTACATCGGC
CTCGGCGCCA TGTTCCCCTC CCGGAGTAAG GAGGTCGAGC ATGTGGCCGG ATCGGAGCTG
CTCGCGGCCA TCCGGAGTTC CATCAGCATC CCCATTGTCG CCATCGGCGG CATTACCCGC
GATAACGGCG CCAGCGTCAT TGATGCCGGT GCCGATGCCG TGGCAGTCAT ATCGGCGGTT
CTGTCCCATC CCGATCCGGC CCTGGCGGCC ACCGAGATAG CACTGCTCTT CAACCGGCGC
GCACCGTTTC CGCGCGGCTC CGTCCTCACC GTGGCCGGCA GCGATTCGGG GGGAGGCGCG
GGCATCCAGG CAGACCTGAA AACCGTCACC CTGCTCGGGA GCTATGGCTC GTCGGTCCTC
ACGGCCCTGA CAGCCCAGAA CACCCGGGGG GTCAGCGGCA TCCACGGCGT ACCGCCGGCG
TTCGTTGCCG ACCAGCTCGA CGCGGTCTTC TCCGACATTC CCGTGGATGT GGTCAAGACC
GGCATGCTCT TCTCGGCGGA AACCATCGTC GCAATCGCCG CGAAGCTTAC CGAGTACCGG
CGGCGAATGG TAGTGGTCGA TCCCGTTATG GTGGCCAAGG GGGGGGCGAA CCTGATCGAC
CGCGGAGCGG TAAGCGTGCT CAAGGAGCGG CTCTTTCCCC TCGCCTACCT CGTTACCCCC
AATATACCCG AGGCCGAGCG GCTCACCGGT GCAAACATCT CCGACGAAGA ATCGATGCGG
GAGGCGGCCC GCCGCCTGCA CCGGCTGGGG GCACGCAACG TTCTTCTCAA GGGCGGCCAC
CTGCTGGCCG GCGACTCGGT GGACATCCTC TTCGACGGGG CAGCCTTCCA CCGCTTCGTC
TCACCGCGAA TCCTCTCGAA AAACACCCAC GGCACCGGCT GTACCTTCGC CTCGGCCATT
GCCACCTATC TGGCCCAGGG CGACCCCCTG CGCGAAGCCA TCGCCCGGGC CAAACGTTAC
ATCACCGCTG CCATCCGCCT TGCCCAGCCC TTGGGACGCG GACACGGACC GGTCAACCAT
ATCCTCGCCG CGGAGGACGT CAGGGACCGG TGA
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| Protein sequence | MASNGHTLRL VINRDKHDSV IRGLYLVTDH DDNLIPRVEA AIDGGARVVQ YRNKNQDRES
RLALGLELRE LCRRRSIPFI VNDDLEMAVS LKADGLHLGQ GDGDPREARR VLGPGKIIGV
STHTLSEALE AQAAGVDYIG LGAMFPSRSK EVEHVAGSEL LAAIRSSISI PIVAIGGITR
DNGASVIDAG ADAVAVISAV LSHPDPALAA TEIALLFNRR APFPRGSVLT VAGSDSGGGA
GIQADLKTVT LLGSYGSSVL TALTAQNTRG VSGIHGVPPA FVADQLDAVF SDIPVDVVKT
GMLFSAETIV AIAAKLTEYR RRMVVVDPVM VAKGGANLID RGAVSVLKER LFPLAYLVTP
NIPEAERLTG ANISDEESMR EAARRLHRLG ARNVLLKGGH LLAGDSVDIL FDGAAFHRFV
SPRILSKNTH GTGCTFASAI ATYLAQGDPL REAIARAKRY ITAAIRLAQP LGRGHGPVNH
ILAAEDVRDR
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