| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0601 |
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| Symbol | |
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| ID | 2685367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 632134 |
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| End bp | 635715 |
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| Gene Length | 3582 bp |
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| Protein Length | 1193 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637125267 |
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| Product | alpha amylase family protein |
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| Protein accession | NP_951659 |
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| Protein GI | 39995708 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTTGGCC TGAACGAGGC GCTTCACGAG GTGGTAATGA CCGGAACGAA ACGTAGAGAA
CTCTATTTCC CCTTTGAACT GCACGTGTCC GGCCGGGCGT GGCAACGCCT CGACCTGGAA
ACGGCAGCCA AGGGGCTTCC GCCATCAGGG GGGCGCATTC TGTTCCTGCG CCGGATCGCA
GAGCGTCTTG ATGTCGCTTC TGAAGCGAAG GGGCGGCAGG TCTTCGCCGG AGCCCTTAAC
CTCTATACGC TCTTGCTTCG GGCGTTGCGC GGCATGGTCG CCCTCTACGA TGAAAAGGGA
CTGCCGGGAG CGCTCCTGTC GTCACTGGGA ACGGCCGGCG CCGTCTGCGG CGAAGACGCT
GTCGAGACGG TTGAGCGGAG TTTCGTGGGG CTTTTCCCTC CTGCCGCGGT GCTTCTCGGC
GGAGAGAGTC CTGATCGCTT TCTGGACGTT GCCGCATACC GCGAACAGCG GCGTTGCCAT
GTGGCGACCG AACTCCTGCT CCTGCGGGTG GCGTCGGAAA ACCGGGCGAC CGATACCTTC
CGCCACCTGT TTGACGACGG CGAGCTGGCA GCCGTTTCTC CCTACCGACG CGTGATGGAA
GCGGTCGAGG GCACGCTTGG AGCGCTTCCT CACGTGCCGG GACTCGGTCT GACCCTTCCC
GAACTGCTGC GTGCCCCCCT CAAGGCTGCG CCCGACTCCC TGGAGGGGCA ACTCTCATTT
GTCCGGGAGC AATGGGGGAC CTTTCTGCCG TCCGAGCTTG TGGAGGATAT CGCCATCGCC
TTCGGCATCC TTGAGGAAGA AACCCGCGCA CGCTGGGGAG GAGCCGGGCC TCCGCAGGTT
CTCAGGTTCG GACCCGGGGC CGGGTTCTCC GGTCCTGACG ACCACTATCC GGAGCCCGAG
CGGTTCTCCC CCGACGTGGA CTGGATGCCG AACGTGGTCC TCATTGCAAA GATGGTCTAC
GTATGGCTCG GGCAGTTGTC CCGTTGGTAC GGCCGCGAGA TCACCCGCCT GGACCAGGTT
CCCGATGCGG AGCTCGACAA GCTGGCCAGC TGGGGAGTTA CGGGACTCTG GCTCATCGGC
ATATGGGAGC GCTCCAGCGC CTCGCGTGCC ATCAAGCACC GCTCCGGCAA TGTCGACGCC
ATCGCATCCG CATATTCACT CTTCGACTAT CGGATTGCCG ACGACTTGGG CGGATGGGAC
GCGCTCCACG ACCTGAAGGA ACGGGCGTTG CGCCGCGGCA TCCGCCTCGC CAGCGACATG
GTCCCCAACC ACACCGGCAT CTACTCCAAG TGGATCGTGG AGCACCCTGA CTGGTTCATC
CAGCTCGACC ACCCCCCCTA CCCCACGTAC CGCTTCACCG GTCCCGATCT CTCCGGTTCC
CCCGAGGTGA GCGTTCACAT CGAGGACGGC TACTGGGACC GCACCGACGC CGCCGTCGTC
TTCAAAATGT ACGATCATCG GGATGGGTCC ACCCGCTACG TGTACCACGG CAACGACGGC
ACGAGCACCC CCTGGAACGA TACGGCCCAA CTGGACTACC TCAAGCCGGA AGTGCGCGAG
GCGGTGATCC GGACCATACT CCATGTGGCC CACAACTTCC CCATTATCCG GTTCGACGCG
GCCATGACCC TGGCCAAACG CCACTACCAG CGCCTCTGGT TTCCTCAGCC GGGGCACAGC
GGAGTCCCCT CACGGGCCGA GCACGGCATG ACCAGGGCCG CTTTTGATGC CGCCATGCCC
GAGGAGTTCT GGCGTCAGGT GGTGGACCGG GTTGCCGCCG AAGCGCCCGA TACCCTGCTG
CTGGCCGAGG CCTTCTGGCT GATGGAGGGA TACTTCGTCC GGACCCTCGG TATGCACAGG
GTATACAACA GCGCCTTCAT GAACATGCTC AAGATGGAGG AGAACGCCAA GTACCGCCAG
ACCATCAAGA ATGTACTGGC CTATGATCAC CGCATTCTCC AGCGGTTCGT GAACTTCATG
AACAACCCCG ACGAGCGGAC CGCCGTAGAG CAGTTCGGCA AGGAGGGAAA GTACTTCGGT
GCCGCAGTGC TGCTGGTCAC CATGCCGGGC CTTCCCATGC TCGGCCACGG ACAGGTTGAG
GGATTCCACG AGAAGTACGG CATGGAGTAC CGGCGCGCCT ACTGGGACGA GCCGGTGGAC
GAGCATTTGG TGTCCGGACA CGAGCGTTGG ATTTTCCCGC TCATGCGCCG TCGCCCCCTT
TTCTCCGGGT CGGGCAACTT CGTGCTCTAT GACTTTTTCG TGAACGGAGC GGTAAACGAG
GATGTGTTCG CCTACTCCAA CCGCCGGGGA GACGATCGGG CGCTCGTTGT CTTCCACAAC
CGGTTTGCCG CCACTTCCGG CTGGATCAGG AGTTCATGCG CCAAGGTCGC CAACCCTGAA
ACGGGTGACA CTGCCCCCGT CCAGACCGAT CTGGGGACGG CCCTCGGCTT CAACGACGAT
GGCCGGCACT ACTACGCGTT CCGCGACCAC GCGGCGGGAC TCGAATACCT GCGAAACGGC
CGTGAGCTTT GCAGGGAGGG GCTGTTCGTT TCCCTGGAGC CGTACGAGTT CCATGTGTTC
CTCGATTTCA GAGAAATCCG TGATGACGAT TTCGGAACCT GGGGTCACCT CTGCCATCGA
TTGAGTGGAG GTGGGGCGCC AAGCATCGAC GAGGAGGTAA AGCTCGTCCG CCATGGTACG
CTCGTGGCGC GGTTCGTCGA TCTCTGGGAC GAGCCGGCGG TGCTTGACAT CCTCGCCTCC
CCCGGCAGCG TCACTGCAGC GCGCCGGAAG GTGACGGCGG CGTTCCGTGA GAAGCTCGTG
GCGTTCCTGA CGGAGTTGGC CCGGGAGACA GGGGCGTCAG GCGAGGTGGG GACCGTTGCT
GACACGATCA TGGCCCGGCT GGCTCTGCGG GTGACGCTGG GCGCAGTCAA GCCGGGAAAG
ACGGACGAGC ATGGCCCCGG CACCTGTGCC GCTCCCGGTG ACGCCTCGCT GGACCGATTG
ATCCGTGGTT GCCTCGCGGT TGTCGGCGAA GCGGGTCGAC TCGCCAGCGC TGAAGGCTAC
CGCGCCCGCT CCGCTGAATG GTTTGTGACC CTGGGGCTGC GGCGAGCTCT GGCCAACATC
CTTCGCGCAG CATGCGATAG CGGCGACAGT GAGGCGTCGC GCGCGGATTG GGCTGTCCTT
CTGGTCGAAG TGCTCCTGGG TCTGGGAGAG GAAGGCCTTG ACACCCCAGA GGCGCTGGAT
CGCTGCCTGG CGGGACTTTT TGCCGACCGC GAGGCAGCCC GTCTTCTCGG CGTCCACCGT
AGCGGGGGTA TCGACTGGTT CGTTCAGGAG CGGTTCGAGG CCCTGGTGGG CTGGATTCTG
TCCCTCGCAG GCCGGGATGC CGCCGTTTCG AAACAAACGG GCTGGCATGC CGGCTACCGA
ACGATGCGTG CCCGCGAGGT GGCGCGCCTG ACGGCGATGG CGCGCACGGC CGGCTATCGG
GTCGATCTCA TGCGGGCGGC CCTGCTGGAG ACGACGGAGC GCAAACGTCC TCGCGCCAGC
AAGAAACCTG TTTCGGCGCC TAAACCTTGT GGCAACCGGT AA
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| Protein sequence | MVGLNEALHE VVMTGTKRRE LYFPFELHVS GRAWQRLDLE TAAKGLPPSG GRILFLRRIA
ERLDVASEAK GRQVFAGALN LYTLLLRALR GMVALYDEKG LPGALLSSLG TAGAVCGEDA
VETVERSFVG LFPPAAVLLG GESPDRFLDV AAYREQRRCH VATELLLLRV ASENRATDTF
RHLFDDGELA AVSPYRRVME AVEGTLGALP HVPGLGLTLP ELLRAPLKAA PDSLEGQLSF
VREQWGTFLP SELVEDIAIA FGILEEETRA RWGGAGPPQV LRFGPGAGFS GPDDHYPEPE
RFSPDVDWMP NVVLIAKMVY VWLGQLSRWY GREITRLDQV PDAELDKLAS WGVTGLWLIG
IWERSSASRA IKHRSGNVDA IASAYSLFDY RIADDLGGWD ALHDLKERAL RRGIRLASDM
VPNHTGIYSK WIVEHPDWFI QLDHPPYPTY RFTGPDLSGS PEVSVHIEDG YWDRTDAAVV
FKMYDHRDGS TRYVYHGNDG TSTPWNDTAQ LDYLKPEVRE AVIRTILHVA HNFPIIRFDA
AMTLAKRHYQ RLWFPQPGHS GVPSRAEHGM TRAAFDAAMP EEFWRQVVDR VAAEAPDTLL
LAEAFWLMEG YFVRTLGMHR VYNSAFMNML KMEENAKYRQ TIKNVLAYDH RILQRFVNFM
NNPDERTAVE QFGKEGKYFG AAVLLVTMPG LPMLGHGQVE GFHEKYGMEY RRAYWDEPVD
EHLVSGHERW IFPLMRRRPL FSGSGNFVLY DFFVNGAVNE DVFAYSNRRG DDRALVVFHN
RFAATSGWIR SSCAKVANPE TGDTAPVQTD LGTALGFNDD GRHYYAFRDH AAGLEYLRNG
RELCREGLFV SLEPYEFHVF LDFREIRDDD FGTWGHLCHR LSGGGAPSID EEVKLVRHGT
LVARFVDLWD EPAVLDILAS PGSVTAARRK VTAAFREKLV AFLTELARET GASGEVGTVA
DTIMARLALR VTLGAVKPGK TDEHGPGTCA APGDASLDRL IRGCLAVVGE AGRLASAEGY
RARSAEWFVT LGLRRALANI LRAACDSGDS EASRADWAVL LVEVLLGLGE EGLDTPEALD
RCLAGLFADR EAARLLGVHR SGGIDWFVQE RFEALVGWIL SLAGRDAAVS KQTGWHAGYR
TMRAREVARL TAMARTAGYR VDLMRAALLE TTERKRPRAS KKPVSAPKPC GNR
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