| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0537 |
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| Symbol | |
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| ID | 2685923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 569343 |
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| End bp | 571391 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637125203 |
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| Product | sensory box/GGDEF family protein |
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| Protein accession | NP_951595 |
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| Protein GI | 39995644 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2202] FOG: PAS/PAC domain
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGACCG TTGCCTTCCG TGCCGACGGG CAGGAGGCGG AGCCCCTTGA ATTCGACCTG
GTGGGCACTC CCTGCGAGCG GGTGGTTCTG GATGCCTACT ATTGCACTCC TGAAGGGGTC
TGCACGCTGT TCCCCCTGGA CCATCTGGCC ATGGCCATGG GGGTCGAGGG GTACGCGGGG
ATCGCCCTGA CCGATGCGGC GGGCAACGTT CTGGGGCCGC TGGCCGTCTT GAGCCGCCGG
CCGCTGGGCG ACAGCGAGCT GGCGGAAACG ATGCTCCGGA TCTTCGCGGC CCGCGCCTCG
GCCGAGCTGG AGCGGACCAA GGCCGAGCAG GCCCGGCGCG AGCAGCTCCA CTTCCTCCAG
GTCCTCATCG ACTCCATCCC CCATCCCATC TTCTACAAGG ACGCCGACCG GCGTTATATC
GGCTGCAATG CCGCCCTGGA ATCGTTCATC GGGCGCACGC GCGAGGAGAT TATCGGCAAG
ACGGTCTTCG ACATCGGCGC GGAGGGCCGG GCGCGCATCT GCGATGCCGT GGACCGCAAG
CTGCTCGCTA ACGGCGGGGT GGAAAGCTAC GACAGCACCA TGATCCACAC TGACGGCAGC
ATCCGTGACA TCATCTTCAG CAAGACGGTC TTCGGGAATA CCGACGGTTC CATCGGCGGC
ATCGTCGGCA CGATCCTCGA TATCACCGAA CGCAAGCGGG CCGAGGAGGC TATCCAGCAA
CTGGCCTATT TCGATGCGCT CACGGGACTG CCGAACCGGA CCCTGCTCAG GGACCGCGTC
AGCCAGCTGC TGTCCCAGGC GCGGCGGGAG GGGGGAGGTT TCGGCGTCCT GCACCTGGAT
GTGGACCGGT TCAAAGGGGT GAATGACTCG CTGGGGCATG CCTGCGGCGA CGTTCTGCTC
TCCACCGTGG CCGGACGGAT CGCTTCGAGT ATCCGGGAGA GCGACACCGT GGCGCGGCTG
GGGAGCGACG AGTTCGTGGT GATTCTGCCG GGGGTGGGGC ACGAAGAGGA CGTGGTGGCG
GTCGTCCGCA AGATAGTGGA AGAGCTGAAC CGGCCTATCG TCATCCAGGG TAATGATATC
TTCTGCACCG CCAGCATCGG CATCGCCATC TATCCGACGG ACGGTTCCAG TGCGGACATC
CTGCTCAAAA ATGCCGACAT GGCCATGCAC AAGGCCAAGG AGTTCGGGGG TGACGGCTAC
CAGTTCTACT CGAGCGAGTT GAACCACCGG GCCATGGAGC GGCTGACCCT GGAGACCAGC
CTGCGCCGCG CGCTGGAGCG CCGGGAGTTT CTCCTGCACT ACCAGCCGCT GCTCGGTATC
GGGTCAGGCC GGATTGTCGG GGTGGAGGCA CTGTTGCGGT GGGACTCGCC GGAACTGGGC
ATGGTGTCGC CGGCCCGTTT CATCCCCCTG GCCGAGGAGA CGGGGCTCAT CGTGCCGATC
GGCGAGTGGG TCCTGCGCTC GGCCTGCGAA CAGCTCAGGG CCCTCCACGA GCTGGGCTAC
ACCGAATTGT GCGTGTCCGT GAACGTGTCG GCGCGGCAGT TCCGGCACGA CGGGTTCTGC
GCCATGGTGG CCGCCGTGCT GGCGGCAGTG GGGCTCGATC CCCGGTATCT GGAGCTGGAA
CTTACCGAGA GCGTCATCAT GGAGCGCTCA GAGACGGCCA AGGGGATTCT GCGGAAGCTG
AAGCAGATGG GGGTGTCGCT CGCCATCGAT GATTTTGGTA CCGGCTACTC ATCCCTGAGT
TACCTGAAGC ACTTTCCCAT CGACCGGCTC AAGATCGACC GCACCTTTGT CAAAGAAGTG
ACCGTGGACC AGGACAATGC CGCCATTGCC GAGGCGATCG TCGCCCTGGC CCACGTGCTG
AATCTGGATG TCGTGGCGGA AGGGGTGGAG ACCGCCGAAC AACTTGCCTT CCTGGCGGCG
CTCCGCTGCG ACGTGGTCCA GGGGTATCAC ATCGCCCGTC CCCTTCCTCC CCGGAATCTG
CTCGAATTCC TTGAAGCGCG GCAGGAGGAT CGTGCCGCCC GCCCCATGCT CAGGTCACTT
CAACCGTAA
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| Protein sequence | MKTVAFRADG QEAEPLEFDL VGTPCERVVL DAYYCTPEGV CTLFPLDHLA MAMGVEGYAG
IALTDAAGNV LGPLAVLSRR PLGDSELAET MLRIFAARAS AELERTKAEQ ARREQLHFLQ
VLIDSIPHPI FYKDADRRYI GCNAALESFI GRTREEIIGK TVFDIGAEGR ARICDAVDRK
LLANGGVESY DSTMIHTDGS IRDIIFSKTV FGNTDGSIGG IVGTILDITE RKRAEEAIQQ
LAYFDALTGL PNRTLLRDRV SQLLSQARRE GGGFGVLHLD VDRFKGVNDS LGHACGDVLL
STVAGRIASS IRESDTVARL GSDEFVVILP GVGHEEDVVA VVRKIVEELN RPIVIQGNDI
FCTASIGIAI YPTDGSSADI LLKNADMAMH KAKEFGGDGY QFYSSELNHR AMERLTLETS
LRRALERREF LLHYQPLLGI GSGRIVGVEA LLRWDSPELG MVSPARFIPL AEETGLIVPI
GEWVLRSACE QLRALHELGY TELCVSVNVS ARQFRHDGFC AMVAAVLAAV GLDPRYLELE
LTESVIMERS ETAKGILRKL KQMGVSLAID DFGTGYSSLS YLKHFPIDRL KIDRTFVKEV
TVDQDNAAIA EAIVALAHVL NLDVVAEGVE TAEQLAFLAA LRCDVVQGYH IARPLPPRNL
LEFLEARQED RAARPMLRSL QP
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