| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0531 |
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| Symbol | dapF |
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| ID | 2686033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 564955 |
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| End bp | 565803 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637125197 |
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| Product | diaminopimelate epimerase |
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| Protein accession | NP_951589 |
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| Protein GI | 39995638 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.46131 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA CCAAAATGCA TGGGGCCGGC AACGACTACG TCTATGTCAA CTGCTTCGAG
GAGACCGTAG GGAACCCTGA GCAGACGGCC ATCAAGGTTT CCAACCGCAA CTTCGGCATC
GGCTCCGACG GGCTCATCCT GATCATGCCC TCCGACAAGG CCGACGTCCG GATGCGCATG
TTCAACTCCG ACGGATCCGA GTCCGAGATG TGCGGCAACG GCATCCGCTG CGTGGCCAAG
TACGCCTACG ACCATGGCAT CGTGACCAAG AAGGAGATCA CCGCTGAAAC CGGCGCGGGC
GTCCTGACGC TCCAGCTCTT CACCGGCGCC GACGGCAGGG TTGACCGGGT CCGCGTCAAC
ATGGGCAAGC CGCGCCTCAC CCGTGCGGAA ATTCCCATGC TGGGCGACCC GGGCGACGGC
CAGGTGGTCG GTCAGCCTCT GAACATCCTC CACACCACGT TCAACATTAC CTGCGTTTCC
ATGGGGAACC CCCACTGCGT CATCTTTGTG GATGACGTGG AGAACTTCCA GGTGGAAAAG
TACGGCCCCC TCATCGAGAA TCACGAGATG TTCCCCCGCC GAACCAACGT GGAATTCGTC
CAGATCATCT CCCGCACCGA GGTACGCCAG AGGACCTGGG AGCGGGGAGC CGGCGAAACG
CTGGCTTGCG GCACCGGCGC CAGCGCCGTC TGCGTGGCCG GGGCTCTCAA CGGCCTCACC
GAGAAGAATA TCCTCAACCA CCTATCCGGC GGCGACCTGG AGCTGGAGTG GGCCGAGGAC
GGCTTCCTCT ACATGACCGG TCCGGCCACC GAGGTGTTCA GCGGCGAAAT CAATCTCGGC
ACGCTGTAG
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| Protein sequence | MKFTKMHGAG NDYVYVNCFE ETVGNPEQTA IKVSNRNFGI GSDGLILIMP SDKADVRMRM
FNSDGSESEM CGNGIRCVAK YAYDHGIVTK KEITAETGAG VLTLQLFTGA DGRVDRVRVN
MGKPRLTRAE IPMLGDPGDG QVVGQPLNIL HTTFNITCVS MGNPHCVIFV DDVENFQVEK
YGPLIENHEM FPRRTNVEFV QIISRTEVRQ RTWERGAGET LACGTGASAV CVAGALNGLT
EKNILNHLSG GDLELEWAED GFLYMTGPAT EVFSGEINLG TL
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