Gene GSU0530 details

Gene Information

• Locus tag: GSU0530
• ID: 2685747
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 564430
• End bp: 564849
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 637125196
• Product: HIT family protein
• Protein accession: NP_951588
• Protein GI: 39995637
• COG category: [F] Nucleotide transport and metabolism; [G] Carbohydrate transport and metabolism; [R] General function prediction only
• COG ID: [COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.335836
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCACCAT CCTGCCCCAT GTGCACCAAG TGGCTCGACG AGCCGGAGTT TCGCATTGCG 
GAGTTGGAGC ACACCCGCGT CATGCTCAAC CGCGACCAGT TCTTTCCCGG CTACACCTTT 
GTCTTCACCC GGGAGCACGT GACTGAGCTG TTCCATCTCT CCCCGCCGGT CCGCCAGGGG 
GTCATGGAAG AGGTGACGGC CGTTGCCGCG GCCCTGTACG ACCTGTTCCA GCCCGCCAAG 
ATGAACTACG AGCTGCTCGG CAACATGGTG CCGCACATGC ACTGGCACCT GGTGCCCCGC 
TTCGCCACGG ACCCCCTGTG GCCCCGCCCC ATCTGGAGCG AACCCCATGC GGAAACCCTG 
CTCGCACCGG AGGAGTACGC CGGGCGGATC GCGCTGATCC GGGACAGGCT CGGGCTCTAG 

 

Protein sequence

MSPSCPMCTK WLDEPEFRIA ELEHTRVMLN RDQFFPGYTF VFTREHVTEL FHLSPPVRQG 
VMEEVTAVAA ALYDLFQPAK MNYELLGNMV PHMHWHLVPR FATDPLWPRP IWSEPHAETL 
LAPEEYAGRI ALIRDRLGL