Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0529 |
Symbol | nfo |
ID | 2686004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 563536 |
End bp | 564426 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637125195 |
Product | endonuclease IV |
Protein accession | NP_951587 |
Protein GI | 39995636 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0648] Endonuclease IV |
TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.143061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGACT ATCTCGGCGC GCACATGTCC ATCGCCGGCG GGATTCACAA GGCTCCGGCG CGGGGAAACC GGGTCGGGTG CGGCGTGATC CAGGTCTTCA CCCAGAACTC CAACCAGTGG CGGGGGAAGA TGCCCACCGA GGGGGAGGCG GCTCTGTTCC GTGAACAGTG GGAAGCCGCG GGCCTCCACG AAATCATCGC CCATGACATC TACCTCATCA ACCTGGCGGC CCCGCCGGGC GAGACACGGG ACAAGAGCCT CGCGGCCTTC CGGGAGGAGA TGGAGCGCTG TACCCGCCTC GGTATCGGCA CTATCGTGAT GCATCCCGGT GCCCACCTGG GCGACGGAGA AGAGACCGGC ATCCGGCGGA TCTGTGAGGC CTTCAACCGC CTGATCCCCG CGGTTCCCGA GTTCACCGGC GTGATCCTGC TGGAGACCAC CGCAGGCCAA GGCACCAGCC TGGGTCATAC CTTCGAGCAG TTGGCCGCCA TTATCGCCGG GACCGCGTTT CCCGACCGCT TCGCGGTCTG CTTCGACACC TGCCACACCT TTGCCGCCGG ATACGACTTC ACCACCGGAG AGGGGTACCG GCGCGTCTTC GCCGAGTTCG ACCGGCTGAT CGGCCTGGAC CGGCTCCGGT GCTTCCACCT GAACGATTCC CGGAAGGGGC TCAACTCCCG GGTGGACCGG CACGAGCATA TCGGCCGGGG AACGCTGGGG CTGGAGCCGT TCCGGTTCCT CATGAACGAT GACCGCTTCA CGACGGTGCC CAAGATTCTC GAAACGCCAA AGGGAGATGA CGACGAGTTT GATATCATGA ACCTGAACAC GCTCCGGAGA CTCGTCCGCC GGCGCACAAC AAAGGAAAGA ACCGAGCCAT GCCCGAGTTG A
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Protein sequence | MNDYLGAHMS IAGGIHKAPA RGNRVGCGVI QVFTQNSNQW RGKMPTEGEA ALFREQWEAA GLHEIIAHDI YLINLAAPPG ETRDKSLAAF REEMERCTRL GIGTIVMHPG AHLGDGEETG IRRICEAFNR LIPAVPEFTG VILLETTAGQ GTSLGHTFEQ LAAIIAGTAF PDRFAVCFDT CHTFAAGYDF TTGEGYRRVF AEFDRLIGLD RLRCFHLNDS RKGLNSRVDR HEHIGRGTLG LEPFRFLMND DRFTTVPKIL ETPKGDDDEF DIMNLNTLRR LVRRRTTKER TEPCPS
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