Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0527 |
Symbol | |
ID | 2687265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 561008 |
End bp | 562702 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637125193 |
Product | TrkA domain-containing protein |
Protein accession | NP_951585 |
Protein GI | 39995634 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.630061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGTAC TCGCCTCCGA ACTGGCCTAT TTCCTGAGGG GCCGCGCCAG ACAGAACCTG AAGGTCCTGC TCCTGTATTG CGCCTTCCTT CTTGTCATGC TCCTGGCCTA CGCGTCCATC TTCCGCTACC TGATGTGGCA TCTCGAAGGA CGCGAATACT CGTTCATGGC GGGGATCTAC TGGACTATCA CGGTGATGAC CACCCTCGGG TTCGGCGACA TCACCTTCCA GAGCGACGCC GGGTACCTGT TCGCCTCTAT TGTCACCGTT TCGGGGGTGA TCTTTCTCCT GATCATCCTC CCCTTCGGCT TTGTCAGCAT GTTCCTGGCT CCCTGGATTG AACGGCGCCT CCGCTACCAC CCCACCATCG AGCTGCCGGA CGACACCCGG GGGCACATCC TCATCTTCGG CATCGACCCC ATCACCCGGA CCCTGATCCG CAAACTGGAG AGCCGCAACC ACCTGTTCGT CGTGGTAACG GACAACTACG ACCAGGCCCT GCACCTGGAA GAGCAGGAGG GGTTCAAGGT GGTCTACGGT TCGCCCACCG ATGCCCACGT CCTGGCCGGC CTGCGGGTGG CGGCGGCCCG AAGCATCATT GCCAACCTGA GCGACCCTGA CAACGCCAAC CTGTGCCTCA CCGTCCGCTC CCTCTGCCAG ACCCCCATCA TTGCCGTGGT CAAGGAACCG GTGCACGGAG AACTGCTCCG GCTGGCCGGA GCGAACCAGG TCGTCCCCCT GACCAGAATC CTCGGCCGCT ACCTGGGCAT CCGGGCCACC ACCTGCGGGG CGCTGGCCCA TATTCTCGAC TCCTTCGGCA ACCTGCAGAT CGCCGAACTG CCCGTCCACG GCACCCCTTT CGCCGGCAAA ACCATCGGGG AATCGGGGAT TCGCCAGCGG ACGGGGCTTT CAATCATCGG TGTCTGGGAA CGGGGCAGCC TCACCACCCC GCAACGGGAG ACGGTCCTGA CCGAGCAGTC GCTGCTGGTG CTGGCCGGCA CCAAGAGCCA GTTGGCCGCC CTGGAGTATC TGATCGGCGA GGCACCGGAA GACGAGTTGA TCTTCATCAT CGGCCACGGC CGCATCGGCT GCGCCGCCGC AGCGTTCCTC GACCGCAAGC CGGTCCCCTT CATCCTGATC GACCGCCAGG AGAGCCCCGT CTGCAACGAT CACGTCGTGG TCTACGGCGA CGCCACCGTG GGCCAGACCC TCAGGCAGGC GGGCATCGAC CGCGCCAGCG GCATCATCGT CACCACCAAT GACGACAGCA CCAACATCTT CCTGACCCTG GCCTGCCGGC ACCTCCACTC CCACATCCGC ATCGTGGCCC GTGCCAACGG GGAGGAAAAC GTCGACCAGC TCTACGCTGC CGGCGCCGAC TTCGTCGTCT CCAACGCCTC GGTGGGTGCC AACATCCTGG GCAACCTGCT GGAGCACAAG GAATCGGCCT TCCTCTCCGA GGGGATGGCC GTCTTCCGGC GGCCGCTGCC CCCCGCCATG GCCGGCAAAA CCATTGCCGA GACCCGCCTG CGCCCCCTCA CCGGCTGCTC CATCGTGGCG ATCGAGGCGC CCGACCGGGC CGACATCCTC ATTTCGCCGC CACCGGAAAC CATCCTCGCA GAAGGGGCCA GACTCATCCT GATCGGCACG TCGGAACAGG AGAAAACCTT TGATCAGACC ATTGCCGCCC GCTAA
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Protein sequence | MKVLASELAY FLRGRARQNL KVLLLYCAFL LVMLLAYASI FRYLMWHLEG REYSFMAGIY WTITVMTTLG FGDITFQSDA GYLFASIVTV SGVIFLLIIL PFGFVSMFLA PWIERRLRYH PTIELPDDTR GHILIFGIDP ITRTLIRKLE SRNHLFVVVT DNYDQALHLE EQEGFKVVYG SPTDAHVLAG LRVAAARSII ANLSDPDNAN LCLTVRSLCQ TPIIAVVKEP VHGELLRLAG ANQVVPLTRI LGRYLGIRAT TCGALAHILD SFGNLQIAEL PVHGTPFAGK TIGESGIRQR TGLSIIGVWE RGSLTTPQRE TVLTEQSLLV LAGTKSQLAA LEYLIGEAPE DELIFIIGHG RIGCAAAAFL DRKPVPFILI DRQESPVCND HVVVYGDATV GQTLRQAGID RASGIIVTTN DDSTNIFLTL ACRHLHSHIR IVARANGEEN VDQLYAAGAD FVVSNASVGA NILGNLLEHK ESAFLSEGMA VFRRPLPPAM AGKTIAETRL RPLTGCSIVA IEAPDRADIL ISPPPETILA EGARLILIGT SEQEKTFDQT IAAR
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