Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0517 |
Symbol | |
ID | 2685955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 550546 |
End bp | 551760 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637125183 |
Product | hypothetical protein |
Protein accession | NP_951575 |
Protein GI | 39995624 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2905] Predicted signal-transduction protein containing cAMP-binding and CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00645936 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGCTCT TTCTCGCGGT AAAAAATGAC GATGTCCTTA GCCGCCGGGG AACCGCGGAC TTCCTGGAAG GGATGCGCCG CGACCTCTTC GCCAGACTCA AGAGCCTCCC CCCCGGCGGC GAATGCCGTT TGCTCAAGGG AGTGACCGAA GCCCTCGACA AAGAGCTCGC CTTCGAGGAT GCCTTCGGCC AGGACTTTCC CCGTCTGCTT GCCGAGACTG AAACAGCCAC CGACGTGAAC GGCCTCATCG ACCTTCAACG GCAACTGGCG GAGAAGGCAG CCGAATACTT TCGCCAACGC GGCTCGGTGC CGGCCTTCGA CATCCTCTGT ACCACCATGA CGGACTACCT GACACGGAGA GCGCTCCAGC TCGCTTTCCG CTGGATGGAA GAGCACGGTC CGGCAGCTCC GGCTGTCGGC TGGGCCTGGC TCGCCCTGGG CGCCTTGGGG CGCGGCGAAG CGGGCCTTTC GGGAGCAGCG GACTTTGCCG TCATCCACGA CGGGGAGGCC CCCGAAGAGA CCTCGTTCTT CGTGGGCCTG GCCGGACGGG CTGCCGGCAT CCTGGAACGA TTGGGCCTTG CCAGCCCCGG CGGAGTCACT CCGGTCGGCG CAGCATGGCG GGGAAGCATG ACCGATTGGC GCAAACGGAT CACCAGCCGG GTTACGGAAG GGGACGGCGA CCTGGGATGG CTTATCGGGC TCACCGATTT GCGCTGCGTA GCCGGCGACT CCGCCCTGGC CGAGGGAATG AACAACCTGG TCCGGTCCAT GCTCGCCTTT CACAGGGACC AGTTCCGGGA GACGGCACGG CACATATCCA TGATGCCCTC GGGATTCGAC TTTTTCGGCA GATTCAGGAC GGAGCGGATT GGTGAGTCGC GGGGAATGTT CAACCTGGGC TACTACGGCA TCTCCCCCCT GGTAGCCAAC GTCAGGGTTC TGGCGGTCCA CGCGGAGATA CCGGAAACGG GCACCATCGA GCGCATCCGG GCACTGCTCC GGAAGGGGCA CATGGATGTG GATCTGGCCG AGCGGTTGCT GCGCGCCTGC CACTGCTTCG GCCGGAGGCG CGCCGCCATG GGCGGTGAGG CCTCCGGCAT TTACGTGGAT ACGGCGAGAC TGACCGAGCA GGAGGAAGAT GAACTCAAGG CAGGCATCGA AGCGGTGGGG ACTCTTCAGC GGCTGGTCTA CACCACCATT ACCGGGCAGG GATAG
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Protein sequence | MPLFLAVKND DVLSRRGTAD FLEGMRRDLF ARLKSLPPGG ECRLLKGVTE ALDKELAFED AFGQDFPRLL AETETATDVN GLIDLQRQLA EKAAEYFRQR GSVPAFDILC TTMTDYLTRR ALQLAFRWME EHGPAAPAVG WAWLALGALG RGEAGLSGAA DFAVIHDGEA PEETSFFVGL AGRAAGILER LGLASPGGVT PVGAAWRGSM TDWRKRITSR VTEGDGDLGW LIGLTDLRCV AGDSALAEGM NNLVRSMLAF HRDQFRETAR HISMMPSGFD FFGRFRTERI GESRGMFNLG YYGISPLVAN VRVLAVHAEI PETGTIERIR ALLRKGHMDV DLAERLLRAC HCFGRRRAAM GGEASGIYVD TARLTEQEED ELKAGIEAVG TLQRLVYTTI TGQG
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