Gene GSU0500 details

Gene Information

• Locus tag: GSU0500
• Symbol: typA
• ID: 2686087
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 533056
• End bp: 534852
• Gene Length: 1797 bp
• Protein Length: 598 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637125166
• Product: GTP-binding protein TypA
• Protein accession: NP_951558
• Protein GI: 39995607
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAGA GAATCAGAAA CATCGCCATC ATTGCCCACG TTGACCACGG CAAGACCACT 
CTCGTGGATG CCATGCTCAA GCACGCCGGA GTGTTCCGGG AAAACGAAGC CATCACCGAG 
CGGGTCATGG ATTCCAACGA CCTGGAGAAG GAGCGGGGCA TCACCATCCT GGCAAAAAAC 
CTGTCGGTCC ACCATGGCCG CTACAAGATC AACATTGTCG ATACCCCGGG CCACGCCGAC 
TTCGGCGGCG AGGTGGAGCG GGTGCTCAAG ATGGTCGATT CGGTGCTGCT TCTGGTCGAT 
GCCCTGGACG GCCCCATGCC CCAGACCCGC TTCGTGCTCA AGAAGTCCCT CGACCTCGGT 
CTGAAGCCGA TCGTGGTCAT CAATAAGATT GACCGCCCCG GTTCACGCCC CGACGAGGTG 
GTGGACATGG TTTTCGACCT GTTTTGCGAA CTGAACGCGA CCGATGAGCA GCTCGACTTC 
CCCATCGTCT ATACCAGTGC CAAGCTCGGA TTCGCCAAAC TCGACCTCAA TTCCGACTCT 
AACAGCATGG AGCCCCTCTT CGCGGTAATC GAGAGTAACG TCCATCCGCC GGCCGGCGAT 
TCGAAGGCCC CGTTCCAGCT CCTCGTGACC AATATCGACT ACAACGACTA CATCGGCCGG 
ATCGCCACCG GCAGGATATT CAACGGCCGG GTGAAGGCCG GCGAGACCGT GGCGCTCGTG 
CGGCGCGACG GGAGCATCGA GCGGGGACGC ATCACCAAGC TCCTGGGATA CGAGGGGCTC 
AAGCAGGTGG AGATCCCCGA GGCGTGTACC GGCGACATCG TTACCGTGGC CGGTTTTGAC 
GACGTGGGCA TCGGCGAGAC GCTGGCCGCT GCAGACAATC CGGTGGCGCT TCCCTATGTG 
TCGATCGACG AGCCGACCAT TTCAATGAAC TTCATTGTCA ATTCCTCCCC CTTTGCCGGC 
CGTGAGGGGA AGTTCGTCAC CTCCCGCAAC ATCCGGGAGC GCCTTGACCG GGAGTTGCGC 
ACCAACGTGT CGCTACGGGT GGAGGATACG GCCAACGCGG ACACGTTCAA GGTTTCCGGC 
AGGGGCGAGC TTCACCTGTC CATCCTTATC GAGAACATGC GGCGCGAAGG ATTCGAGATG 
GCGGTTTCCA AGCCGGAGGT CATCTTGCGG GTGATCGACG GCACGAAGAT GGAGCCGATG 
GAGTACCTGG TGGTGGACGT TCCCTCCGAG TTCCAGGGTG CCATCATCGA GAAGATGGGA 
CCTCGCAAGG GGGAGATGAC CTCCCTGCAG CCCATGGGCG AGACAGTGCG GCTGGAGTTT 
GTCGTGCCGG CCCGGGGGCT CATCGGGCTG CGGGGAGAAC TCCTCACCGA GACGCGGGGC 
ACTGCGGTCA TGACCCACAC CTTCCACGAC TATGCCCCTT ACAAGGGTGA TATCCCGGGG 
CGCAAGAACG GCGTCCTCAT TGCCATGGAA CTCGGCGAAA CCACTGCCTA TGCCCTCGAC 
GCACTCCAGC CCCGGGGAAT CCTCTTCATC GGTCCCGGTG TGGAAGTCTA CGGGGGGATG 
ATCATCGGCC AGCACGCCAA GGACAACGAT CTGGACGTGA ACCCCTGCAA GGGAAAGAAA 
CTTACCAATG TCCGTGCCTC CGGTTCGGAC GACGCCATCA AGCTCACCCC GCCGCGCATC 
CTTACCCTGG AGCAGGCCCT GGAGTTCATT GACGACGACG AACTGGTAGA AGTGACCCCG 
CAGTCCATCA GGCTCAGAAA GAAAGAACTC GACCCGAACA AGCGGAAACG GAAGTGA 

 

Protein sequence

MQERIRNIAI IAHVDHGKTT LVDAMLKHAG VFRENEAITE RVMDSNDLEK ERGITILAKN 
LSVHHGRYKI NIVDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG 
LKPIVVINKI DRPGSRPDEV VDMVFDLFCE LNATDEQLDF PIVYTSAKLG FAKLDLNSDS 
NSMEPLFAVI ESNVHPPAGD SKAPFQLLVT NIDYNDYIGR IATGRIFNGR VKAGETVALV 
RRDGSIERGR ITKLLGYEGL KQVEIPEACT GDIVTVAGFD DVGIGETLAA ADNPVALPYV 
SIDEPTISMN FIVNSSPFAG REGKFVTSRN IRERLDRELR TNVSLRVEDT ANADTFKVSG 
RGELHLSILI ENMRREGFEM AVSKPEVILR VIDGTKMEPM EYLVVDVPSE FQGAIIEKMG 
PRKGEMTSLQ PMGETVRLEF VVPARGLIGL RGELLTETRG TAVMTHTFHD YAPYKGDIPG 
RKNGVLIAME LGETTAYALD ALQPRGILFI GPGVEVYGGM IIGQHAKDND LDVNPCKGKK 
LTNVRASGSD DAIKLTPPRI LTLEQALEFI DDDELVEVTP QSIRLRKKEL DPNKRKRK