| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0492 |
|---|
| Symbol | |
|---|
| ID | 2686180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 524995 |
|---|
| End bp | 525879 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637125159 |
|---|
| Product | phage integrase family site specific recombinase |
|---|
| Protein accession | NP_951551 |
|---|
| Protein GI | 39995600 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0248661 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTTG AAGTAACCAC TTTCATCCGC TACCTGGAGA ACGAGCGCGC CGTTTCCCCC
CACACTCGCG CCGCCTATGA GTCCGACCTT GCCCAATTCA GGGACTTCGT CCGGGGAGAA
CTGGGCGCCG GAGCCGGCGC GGCGGCCATA AGCCACCTCC TGGTCCGGCG CTGGCTTGCC
CAGCTCCATC AATCTCACGC CAGGAGCTCA ATCGGCCGTA AACTGGCCGC AGTGCGTGCA
TTTTTTACCT ACCTTGTCCG CACCGGAGCC CTGCCGCGCA ACCCGGCAGA ACTGGTCAGC
ACCCCCAAGC GCGAGAAGAA GGTCCCGTTC CACCTGAACA TCGATGAGGT GACCGCCCTG
GTGGAGTCTC CCCGGGAACC CGGCGTCCTG AGCCTGCGCG ACCGGGCCAT TCTGGAAACC
CTCTATTCCT GCGGCGTCAG GGTTTCGGAG CTGACCGGCC TCAATGTGGG GGGGATCGAC
CTGGCTGACG GCACGGTCCG TGTCCTCGGC AAGGGTGGCA AGGAACGGGT AGTTCCGATC
GGGAGCCATG CCCGCCTCGC CCTAAGCTCC TATCTGGCCG CCCGTAACCA CCCTCCCCTG
GAGGTCCCCC TTTTCACCAA CGCTCGGGGA GGCCGGCTTA CCGCCCGTAG CGTCCGGCGG
GTGGTGGACA AGCATATCCT GAAAGTCGCC GCCATGAGGA AGATATCTCC CCACACCCTG
CGCCACACCT TTGCCACTCA CCTCCTTGAG GGAGGAGCCG ATCTGCGTGC CATCCAGGAA
CTGCTGGGAC ATGCCTCGCT CTCAACCACC CAGAAATATA CCCACGTGGG AATCGACCGT
CTCATGGAAG TGTACGACAA GGCCCATCCC AAGGCACGCA CCTGA
|
|---|
| Protein sequence | MEFEVTTFIR YLENERAVSP HTRAAYESDL AQFRDFVRGE LGAGAGAAAI SHLLVRRWLA
QLHQSHARSS IGRKLAAVRA FFTYLVRTGA LPRNPAELVS TPKREKKVPF HLNIDEVTAL
VESPREPGVL SLRDRAILET LYSCGVRVSE LTGLNVGGID LADGTVRVLG KGGKERVVPI
GSHARLALSS YLAARNHPPL EVPLFTNARG GRLTARSVRR VVDKHILKVA AMRKISPHTL
RHTFATHLLE GGADLRAIQE LLGHASLSTT QKYTHVGIDR LMEVYDKAHP KART
|
|---|
| |