| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0491 |
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| Symbol | rhlE-1 |
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| ID | 2686040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 523215 |
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| End bp | 524567 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637125158 |
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| Product | ATP-dependent RNA helicase RhlE |
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| Protein accession | NP_951550 |
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| Protein GI | 39995599 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.14662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTTTG CTGAACTGAA ACTTGCCCCG CACATTCTCA AAGCCGTAGC CGCCTGTGGT
TACACAGAGC CGACGCCGGT CCAGGCTGCC GCAGTTCCCC GCGCACTGGA GAACGTGGAC
CTGCTTGCCA CCGCCCAGAC CGGTACCGGC AAAACCGCCG CATTCGTCCT CCCGGCCCTG
CAACGGCTGA GTTCTCCGCC TCAGGGCCCC GGGCGCGGGC CGCGTGTGCT CGTGCTCACT
CCTACCCGTG AGCTGGCCCA GCAGGTTACC GACGCAGTGC GGACGTACGG GGCATTCATG
CGGGTACGCA GTGGCGCCAT CCTCGGCGGC ATGCCCTACC ACGCACAGCT CCGCCTTCTC
TCCGCGCCCG TTGATTTCAT CGTGGCCACG CCGGGTCGGC TGGTAGACCT GCTCGACCGG
AGGAGTCTCG ATCTTTCCCG TCTCGAATTG CTGGTCCTCG ACGAAGCGGA CCGGATGCTC
GACATGGGGT TCAGCGACGA CGTGGACCGC ATCGCCGCCG CATCCCCCGC CACGCGTCAG
ACCCTGCTGT TTACGGCAAC CATGGACAGC GCCATGGCCA GACTGGCGGG CCGGCTCCTG
CGTGAGCCGG AGCGGATCGA CATCGCCGGC ACCAAAACTA CCCATGAGCA CATTGAACAG
CGCCTTCACG TGGCAGATGA CCTGCACCAC AAGAACCGGC TGCTGCGGCA CCTGATTACC
GACGAAAGCC TGCGCAGGGC AATTATCTTT TCGGCGACCA AGCGTGATGC CGAAAACCTG
GCACTGGAAC TCAAGGCCCA GGGCCATTCG GCAGCAGCAC TCCATGGCGA CATGCCCCAG
AACGCCCGGA ATCGAACCAT TGCCGCCATG AAGCAAGGAC GGATCAGGCT TCTCGTAGCC
ACCGACGTGG CAGCCCGGGG GCTGGATGTT ACCGGCATCA GCCATGTCAT CAACTTCGAC
CTGCCCAAGT TCGCCGAGGA TTACGTCCAT CGCATCGGCC GCACCGGCCG GGCAGGCGCC
TCGGGAATCG CCATCTCCTT CGCCTCGCTC AACGAGGTCA ATTACCTGGC CCGCATTGAG
CGTTACATCG GCCAGACACT CCCCGAACAC CACATCCCTG GGCTGGAACC CTCGCGCCCG
CTTCGCCGCG TATCAGCGGG ATCAGGCCGT AAACCGGGAA TGGGAGCCGG TCCCGCCCGG
AAGGGCTCCT CGAACCGCCC CTCCGGCGCC GCGCCCGGCC GGTCCGGTAA ATCGTCGGAC
CGTACATCCT GGGGGAGCAG ACGGTCAAAA GATCCGGTTG TGGAATACCG GACAGGGAGG
CACGGAGCAG GACAACCCCG TAGATCATCA TAA
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| Protein sequence | MTFAELKLAP HILKAVAACG YTEPTPVQAA AVPRALENVD LLATAQTGTG KTAAFVLPAL
QRLSSPPQGP GRGPRVLVLT PTRELAQQVT DAVRTYGAFM RVRSGAILGG MPYHAQLRLL
SAPVDFIVAT PGRLVDLLDR RSLDLSRLEL LVLDEADRML DMGFSDDVDR IAAASPATRQ
TLLFTATMDS AMARLAGRLL REPERIDIAG TKTTHEHIEQ RLHVADDLHH KNRLLRHLIT
DESLRRAIIF SATKRDAENL ALELKAQGHS AAALHGDMPQ NARNRTIAAM KQGRIRLLVA
TDVAARGLDV TGISHVINFD LPKFAEDYVH RIGRTGRAGA SGIAISFASL NEVNYLARIE
RYIGQTLPEH HIPGLEPSRP LRRVSAGSGR KPGMGAGPAR KGSSNRPSGA APGRSGKSSD
RTSWGSRRSK DPVVEYRTGR HGAGQPRRSS
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