Gene GSU0475 details

Gene Information

• Locus tag: GSU0475
• ID: 2686122
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: -
• Start bp: 506171
• End bp: 508039
• Gene Length: 1869 bp
• Protein Length: 622 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637125142
• Product: sensory box histidine kinase
• Protein accession: NP_951534
• Protein GI: 39995583
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCAGCT CCGACCTCGT ATCGCGAAGC GCACGCTTCG CCCTGGTGAT GCTGTTCCTC 
GCCGCGCTCG TCCTGACGAG CCGCGTCAAC TATCTCTTAT TTCATACGCT TACCGAAATC 
GTCACCGTAG TCGCGGGATG CGGCATCTTC ATGGTCGCTT GGCACGCCCG GCGCCAGATC 
GATAACCACT GCATTCTGCT CATCGGCATC TCCCACCTGT TCGTGGCAAT CATTACCCTG 
TTCCACGCCC TGAGCTACCG GGGGATGGGG GTCTTCCCCG GCGCGGGCAC AAACCTCTCC 
ACCCAGCTCT GGATCGGCTC GCGACTGCTG CAGGGAGCGT CGCTGGCGCT TGCACCGCTG 
TTCGTCAGAA AGCGGCTCAA TCCCTCTGTT ACCGTTACCG CTTACATGGC CGCAACGTCA 
CTTTTCCTGC TGTCAATCCT GTGCGGGGAT ATCTTCCCCC TCTGCTTCTC GGACGAGGTG 
GGGCTCACCC CGTTCAAAAA GGGCGCCGAG TTCCTGGCTG GGATATTCAT TCTCGCTGCC 
CTGACAGGCT TGCTGACCAA GCGCCGGCAC TTCGACGCCC GAGTGTTCCG GATGCTTTCG 
CTCTCCCTGG TCTTTCTTGC AACGAGCGGC TTCGTTTTTG CTCTCAACAC CGGCATCTCC 
AGCCTCACCG GCATGACGGG ACATCTGCTT ACGCTCGGCG GCTTCATACT CATCTACCGC 
GCCATGGTGG AAACGGGGCT GGAACGCCCC TACGATCTGC TGTTCCGTGA CCTGAAAGAA 
AGCGAAGAGC GCTACCGCAG CCTCTACAAC AGGACTCCCG TCATGCTCCA CTCCATTGAC 
CGGGAGGGAA AAATCGTCAA TGTCAGCGAT TTTTGGCTGG AAACCCTCGG CTACCGGCGC 
GACGAGGTGC TGGGCAGGCT TTCCGCCGAT TTCATGACTG ACGAGTCACG GTCGTACGTG 
ATCGGGACGG TCGTCCCGGA ATTCCTCCGT ACCGGACGCA CCAGAGATAT CCCGCTCCAT 
CTGCTGACCA GCAGCGGAAA GGTCATCGAC GTTCTCCTTT CGTCTGAGGC GGAACGAGAT 
GAAGAGGGAG AAATCGTGCG TTCCCTGTCG GTCATGACCG ACGTGACGGA GCAGCGGCGT 
GCGGCCCGGC AGATCGAGCG ACTCAACGAA AGTCTCGCCT CCCGGGCCAT GGACCTGGAA 
GTGGCCAATG GCGACCTGGA GGCGTTCAAC TACAGCGTCT CGCACGATCT GAGATCGCAC 
CTGACCGTGA TCCGGGGCTT CAGCGACGTT CTGCTCGAGA TCTGCACAGA CAAACTCGAC 
GATGAATGCC GCAGCTACGT GCGTCACATC GGGGAAGAGA CGGGGCGCAT GAACGGACTC 
ATCGGCACCC TGCTCGACTT TTCCCGCGTG GCCCGCGTAG AACTGGAACG GGTACCGGTC 
AACCTGAGCA CGCTGGCAGA GGAAATTGCC CTGGAGCTCA GGATGAAGGA CCAGGAGCGC 
ATGGCAGAGT TCATCATTAT CGATGACGCC GACGTGACCG CCGATCCGGG GCTCATGAGG 
GTTGTGATGG AGAATCTGCT GGGCAATGCC TGGAAATACA CGGGCAGGCG GGAACAGGCC 
GTAATCGAGT TCGGCAAGGA AGAGATGGAG GGTCAAACCG TGTTTTTCGT CCGGGACAAC 
GGAGCGGGGT TCTCGTCACA ACAGGCCGAC AAACTCTTTC TTCCCTTCCA GCGCCTCCAC 
GGCCGGAGCG AATTCCCGGG GCACGGCATC GGCCTCGCAA CGGTCCACAG GATCATCTCC 
CGCCATGGTG GCACAATCTG GGCCCAAGGG GAAGAGGGCG CCGGAGCCGT ATTCTATTTT 
ACGCTGTAA 

 

Protein sequence

MTSSDLVSRS ARFALVMLFL AALVLTSRVN YLLFHTLTEI VTVVAGCGIF MVAWHARRQI 
DNHCILLIGI SHLFVAIITL FHALSYRGMG VFPGAGTNLS TQLWIGSRLL QGASLALAPL 
FVRKRLNPSV TVTAYMAATS LFLLSILCGD IFPLCFSDEV GLTPFKKGAE FLAGIFILAA 
LTGLLTKRRH FDARVFRMLS LSLVFLATSG FVFALNTGIS SLTGMTGHLL TLGGFILIYR 
AMVETGLERP YDLLFRDLKE SEERYRSLYN RTPVMLHSID REGKIVNVSD FWLETLGYRR 
DEVLGRLSAD FMTDESRSYV IGTVVPEFLR TGRTRDIPLH LLTSSGKVID VLLSSEAERD 
EEGEIVRSLS VMTDVTEQRR AARQIERLNE SLASRAMDLE VANGDLEAFN YSVSHDLRSH 
LTVIRGFSDV LLEICTDKLD DECRSYVRHI GEETGRMNGL IGTLLDFSRV ARVELERVPV 
NLSTLAEEIA LELRMKDQER MAEFIIIDDA DVTADPGLMR VVMENLLGNA WKYTGRREQA 
VIEFGKEEME GQTVFFVRDN GAGFSSQQAD KLFLPFQRLH GRSEFPGHGI GLATVHRIIS 
RHGGTIWAQG EEGAGAVFYF TL