| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0437 |
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| Symbol | ubiD |
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| ID | 2687261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 469239 |
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| End bp | 470654 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637125103 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | NP_951496 |
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| Protein GI | 39995545 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTAACG GTGATCTTCA CGATTTTCTT GCCGAGTTGG AACGGCTCGG TGACCTTCAT
CGGGTGGCGG CTGAAGTCGA CCCGGTGCTT GAGGTGGCCG CCATCACCGA CCGGGTGAGC
AAGCTGCCGG GCGGGGGGAA GGGGCTTCTT TTCGAGCGCG TGAAGGGCTC CCGCTTCCCA
CTGGTCACCA ACGTCTTCGG CTCGGCCGGA CGGGTGGCAG CCGCCCTTGG CGCGGCAACC
CTCGACGACT TGACGGCGCG GATGGAGTCG CTCCTCGCCG CCGTGCCCCC CGCGAAAACG
GCATCCCCCC TGGAGGCGAT GGCCTCCCTG GCCGAGATGC GGCGCTTTGC CCCCATGATC
GTGGAGAAGG CGCCCTGCCA GGAGGTGGTG GAGGCGCCGG ACCTCCTGCG CTACCCGTTT
CCGCACTCCT GGCCCGGCGA CGGTGGCCGC TTCATCACTC TTCCCCTTGT TGTTACCCGT
GACCCGGAGA CGAACACTCC CAACTGCGGC ATGTACCGCG TGCGGGTGGT GGATGGAGCC
AGCGCCGGCA TCCGGTGGTA TGCGGGGAAG GGGGGCGAGC TCCACTGTCG GCGCCATCGG
GAGCGCGGGG AGCGGATGCC CGTGGCCGTG GCCATCGGCG GCGATCCGGC GGCAATCCTG
GCGGCGATCC TTCCCCTTCC CGAGGGGTTC GACGAAATGC TCTTTGCTGG TTTTCTCCGG
GGGCGCCCCC TGGAGCTGGC GCGCTGCCGG ACCAGCGACC TGCTGGTCCC GGCCGGGGCG
GAACTGGTTC TGGAAGGCTA TGTGGAGCCC GGCGAGACGG TCATGGACGG CGCCTTCGGC
AACCATACGG GCTTTTACGC CCCGGCGGCA TCGGTGCCCC TCATGCGGCT CACCTGCATA
ACGCGCCGCG CCGATTGCCT CTGCCCGGCC ACGGTGGTGG GCCGGCCCCC CATGGAGGAC
TGCTATCTGG CCAAGGCGGC GGAGCGGCTC CTGCTGCCGG TGCTCAGGAT GCGCTGGCCC
GAGATCGTCG ACATCAACTA TCCGCTGGAA TGGATATTCA ACGGAGGCGC TGTTCTTTCG
CTGCGGGAAT GCTCTTCCTC CCGGGTCCGC CGGATCGTCA CGGAACTTTG GAGTTCGGGG
CTTGCCGGGC CCGGCAGGCT TCTGGTGGCG GTGGACGAGG GGACGCGGGT CGATGATCCC
GCCGACGTGG CTTGGCGGGC CATGAACGCG GTGGACTGGC GGACCGATCT GATCATTGCC
GAGCGTGACG CCGCAGCCGC CTGGCCCGGC CTCGGTTCGC GGCTGGCCAT CGACGCCACC
CGATCCGCTG CCCGCCGCTA CGGAGCAGAA GAACTCGTGC CGGACCGGGA GACGGCCCGG
CGTGTGGACT CGCGTTGGAG GGAATACGGA TTCTGA
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| Protein sequence | MANGDLHDFL AELERLGDLH RVAAEVDPVL EVAAITDRVS KLPGGGKGLL FERVKGSRFP
LVTNVFGSAG RVAAALGAAT LDDLTARMES LLAAVPPAKT ASPLEAMASL AEMRRFAPMI
VEKAPCQEVV EAPDLLRYPF PHSWPGDGGR FITLPLVVTR DPETNTPNCG MYRVRVVDGA
SAGIRWYAGK GGELHCRRHR ERGERMPVAV AIGGDPAAIL AAILPLPEGF DEMLFAGFLR
GRPLELARCR TSDLLVPAGA ELVLEGYVEP GETVMDGAFG NHTGFYAPAA SVPLMRLTCI
TRRADCLCPA TVVGRPPMED CYLAKAAERL LLPVLRMRWP EIVDINYPLE WIFNGGAVLS
LRECSSSRVR RIVTELWSSG LAGPGRLLVA VDEGTRVDDP ADVAWRAMNA VDWRTDLIIA
ERDAAAAWPG LGSRLAIDAT RSAARRYGAE ELVPDRETAR RVDSRWREYG F
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