Gene GSU0436 details

Gene Information

• Locus tag: GSU0436
• Symbol: pilT-3
• ID: 2686364
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 467785
• End bp: 468855
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637125101
• Product: twitching motility protein PilT
• Protein accession: NP_951495
• Protein GI: 39995544
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT
• TIGRFAM ID: [TIGR01420] pilus retraction protein PilT

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCACGTA TCGACGCACT GTTCAAGCTG CTGAAGGAGC AAGGGGCCTC CGACCTCCAC 
CTGTCGTCCG GGGCTCCGCC CATTTTCAGG CTTCACGGAG AGATGGCGCG GCAGAACTTC 
AAGGTTCTTT CCCACGAGGA ACTGACGGCC ATCCTCTACG AAATCCTGAC CGACAAGCAG 
AAGGCCGATT TCGAGGAGCG GCGGGACCTG GACTTCGCCT ATGCCATTCC CGGCCTGGCC 
CGGTTCCGGG GGAACTACAT GATGACCCAC CGGGGCATCG CCGCGGTCTT CCGGATCATC 
CCCAGCAAGA TCCTCTCGGC AGACGACCTG AGCCTTCCCG ACGGGGTTCG CCGCATGACC 
CAGTTCAAGA AGGGGCTCGT GCTGGTCACC GGGCCCACGG GGTCGGGCAA GTCCACCACC 
CTTGCCGCCA TGATCGACCT CATCAACGCC ACCCGCAAGG AGCACATCCT CACTCTGGAA 
GATCCTCTCG AATTCATCCA CGAGAACAAG ATGTCGCTCC TGAACCAGCG GCAGATCGGC 
GAGCACTCCC TGAGTTTTTC CGCCGCCCTT CGCGCCGCCC TGCGGGAGGA CCCCGACGTG 
ATCCTCGTGG GCGAGATGCG GGACCTGGAG ACCATAGGCC TCGCCATGAG CGCAGCCGAG 
ACCGGCCACC TGGTCTTCGG CACCCTCCAT ACCAACTCGG CGGCCAAGAC CATCGACCGG 
ATCATCGACG TTTTTCCCAC CGATCAGCAG GAGCAGACCC GGGCCATGCT CTCCGAATCT 
CTCAAAGGGG TCGTCTGCCA GCAGCTTCTC AAAACCGCCG ACGGCAAGGG GCGGGTTGCG 
GCACTGGAGA TCATGCTCGG CACACCGGCC ATCGCCAACC TGATCAGGGA GGGGAAAACC 
TTCCAGATCC CCTCCATCAT CCAGACTGCC AAGCGTGACG GCATGCAGCT CATGGACCAG 
CACCTGCTGG ACCTCTTCAA GACCAAGCGG ATCACCGCCG AAGAGGCCTA CCGCTGCGCC 
CAGGACAAGA AGCAGTTCGA GCAGTACCTG ACGGAAAAGC CGGGCCAGTA G 

 

Protein sequence

MARIDALFKL LKEQGASDLH LSSGAPPIFR LHGEMARQNF KVLSHEELTA ILYEILTDKQ 
KADFEERRDL DFAYAIPGLA RFRGNYMMTH RGIAAVFRII PSKILSADDL SLPDGVRRMT 
QFKKGLVLVT GPTGSGKSTT LAAMIDLINA TRKEHILTLE DPLEFIHENK MSLLNQRQIG 
EHSLSFSAAL RAALREDPDV ILVGEMRDLE TIGLAMSAAE TGHLVFGTLH TNSAAKTIDR 
IIDVFPTDQQ EQTRAMLSES LKGVVCQQLL KTADGKGRVA ALEIMLGTPA IANLIREGKT 
FQIPSIIQTA KRDGMQLMDQ HLLDLFKTKR ITAEEAYRCA QDKKQFEQYL TEKPGQ