| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0435 |
|---|
| Symbol | |
|---|
| ID | 2686392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | + |
|---|
| Start bp | 466122 |
|---|
| End bp | 467771 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637125100 |
|---|
| Product | MSHA biogenesis protein MshE, putative |
|---|
| Protein accession | NP_951494 |
|---|
| Protein GI | 39995543 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGCA TCGTCAAGGA AGGGTCTCTC GGGTCCATTC TCTTCAAATG CCAGATCATC
AGCGAGGACG ACATCCGGCG GGCACTCGAT GAGCAGGAGC GCACCGGAGG CCGCTTCGGC
GAGGCACTGG TATCACTCGG CATTGTAACC CAGGAAGACA TCGACTGGGC CCTGTCGAAC
CAGCTCAACA TCCCCTACGT ACGCCTCAAG CCGGCCATGG TCGACCGGGA TGCCGTGGCG
TTGGTCCCGG CGGTCATGGC CCGACAGCAT AATCTCATCC CCCTGATCAG GGCCGGCGAG
GAACTGAGCA TCGCCATTGC CGACCCGCTC AACGTGGCGG CAGTGGCGGC CGTGGAAAAG
GAGACCGGGT GCGCCGTGTC GGTTTCCGTG GCGCTCATCC GGGAGATCCG GGAGATGCAG
GAGCGTTTCT ACGGACCGCC CGACACGGAG GAACGCCTGG GGTTCACGTC GTCGGCGTTC
CCACCCCAGG CCCTTGCCGC CATGAATCAC GACCTGACAG GGGGGAAGTT CATCGATTAC
CTGTTGCTGT TCGTGGCCCA GCAAAAGCTC AGCTCCCTTT CGCTCCACCC CCTGGGGGAC
AGGGTGTCGG TGATTGGCCG GCGCGGCGGC ACCACGCGGG AGGTCGGACA GCTTGCCCCT
TCCCGCTATC CCGACGTGGT CATGCACGTC AAGAAACTTG CCCACATCGA CGGGGCCCGG
TTCTCCGCCC GTGGGGGGCT ATCCTTTGCC CTGAAGGGCC GCTCCATTCC CTTTCAGGTG
GCTACCCTGC GGGGAGAAGG CGGCGATCAC CTCACCTTCA GGATGACGGT GGCGGCATTG
TTCCCGACAT CCCTTGCCGA CCTGGGGCTG ACGGACGACC AAGTCCGGCA GTTTGCCGAT
CTGGCGGCGG CCGGTCGCGG CATGGTGGTG ACCGGAGCCC GGGATCGGGA GATTCGCCGC
CGGCTCACGG ATCTCTACCT TCAGGAGCAT GAGGCGGAGG GGAAGACCGT GCTGGTCGTC
GGCAGCGGCG CCGGCACGGG AGAGCAGCGG TTCCCCCGTA TTCCGGTGCC GTCCGACGCG
GATCTGAGCG CTGTGGTTTC AGCCTGTCTG GAGCATGATC CGGATATTCT CGTCCTGGAG
GATGTCACTG ACGGCCAGGC CTTTGCGGCA GCATGCCGGG CAACTCTGCG CGGTAAGCTG
GTGGTGGCGG GGATCGGCTG CGGTGACGCC GTCGGCGCCC TGGACCAGCT TATCGCCTTC
CGGGACATGC ACGTTCTCGT GCCTGCGTAT CTGCGGGGGG TGATTACCTG CACGCCGATC
CGGCCCCTGT GCCCCGCATG CCGGCGAAGC GAGCCATTCC CCGCCGCAGA GCGGGCGGCT
CTGGGGATCG GTGCCGACGT CACCTCTTGC TGGCGGTCGG CGGGATGCGA ATCCTGCGAC
CAGACCGGCC ATGACGGCAG GCGCTACCTG CTGGATGTGC TGGTTTTGGA CCACGACCTC
CGGGAGCGGT TCGAGGCGGC CCGCAACGGG GCAGAGGTGA TCGAGCATTT GCGCGGACAG
GGTTGGCGCG GGATCACGGA CGAGCGGCAG ACCCTGCTGG CTGAAGGCAC TATTTCGCTG
GAGGAGTACG CCTCCTCCCT GCACGGTTGA
|
|---|
| Protein sequence | MESIVKEGSL GSILFKCQII SEDDIRRALD EQERTGGRFG EALVSLGIVT QEDIDWALSN
QLNIPYVRLK PAMVDRDAVA LVPAVMARQH NLIPLIRAGE ELSIAIADPL NVAAVAAVEK
ETGCAVSVSV ALIREIREMQ ERFYGPPDTE ERLGFTSSAF PPQALAAMNH DLTGGKFIDY
LLLFVAQQKL SSLSLHPLGD RVSVIGRRGG TTREVGQLAP SRYPDVVMHV KKLAHIDGAR
FSARGGLSFA LKGRSIPFQV ATLRGEGGDH LTFRMTVAAL FPTSLADLGL TDDQVRQFAD
LAAAGRGMVV TGARDREIRR RLTDLYLQEH EAEGKTVLVV GSGAGTGEQR FPRIPVPSDA
DLSAVVSACL EHDPDILVLE DVTDGQAFAA ACRATLRGKL VVAGIGCGDA VGALDQLIAF
RDMHVLVPAY LRGVITCTPI RPLCPACRRS EPFPAAERAA LGIGADVTSC WRSAGCESCD
QTGHDGRRYL LDVLVLDHDL RERFEAARNG AEVIEHLRGQ GWRGITDERQ TLLAEGTISL
EEYASSLHG
|
|---|
| |