| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0410 |
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| Symbol | fliF |
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| ID | 2686495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 440788 |
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| End bp | 442371 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637125075 |
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| Product | flagellar M-ring protein FliF |
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| Protein accession | NP_951469 |
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| Protein GI | 39995518 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAG CCCTGAACAA ACTGATCCAG CCTTTCATGG CACTGCCACC GGCCAAGCGT
TGGGTGGTGG GAGGCGTTGT CGGCCTGTCG GTCATCGCCT TCACCATCCT GATTCTGGTG
GCGAACCGGA CGGACTATCG CCCCCTCTTC ACGAACCTGA CGAGCGAGGA TGCCGGCGAG
ATCGTGACCA AGCTCAAGGA GCAGAAGGTC CCCTATCGTA TCGCCGCCGA CGGCAAGGCG
ATCCTTGTCC CCTCCGACAA GGTGTACGAT CTGCGGCTTT CGTTGGCCTC CGACGGCCTG
CCCCAGGGGG GAGGAGTCGG GTTCGAGATA TTCGACCGGA AGAATTTCGG CATGACCGAT
TTCGTTCAGA AACTCAATTA CCAGCGGGCT CTCCAAGGTG AATTGTCTCG CACCATCAGC
CAGATTTCAG GGGTGGAGCA GGCCCGGGTG CACCTGGTGA TTCCCGAGAA GTCGCTTTTT
AAGGAGGACG AAAAGCCGGC CACGGCTTCG GTGGTCCTGA AGGTGAAGGG GCAGCGCCAG
CTTCGTGAAA ACGACGTGCA GGGGATCGTC CACCTGGTTG CGTCCGCCAT CGAGGGGATG
AACCCGGAGC ATGTGACGGT TCTCGATCAG AAGGGCAAGC TCCTGTCCAA AAACACCCCC
GGGGATGCAG CAGGCAAGAT GACCGCCTCC ATGCAGGAGG TCCAGCGGGC CTATGAACGG
AGTACCGAGG AACGCCTCCA GTCGCTGCTG GACAAAGCAG TGGGTGCCGG CAAGTCGGTG
GCCCGGGTTT CGGCGGTCTT CGATTTCCGC CAAGTGGAGC GCTACGAGGA AAAATACGAC
CCCGAGACCG TGGTCCGCAG TGAGCAGCGG TCCGAGGAGA AGCAAGATGG CTCGACGGTC
ACGGGCGGGG TGCCCGGCGT GCAGACCAAC CTGGGGCGCA CGGCCGGCCA GCCCGCCGGA
ACCTCCGGCG GCGGCAGCAA GAACGACGAA ACCCTCAACT ATGAGGTGAG CCGCGCCACC
GCCCGCACCA TCGAACCGGT GGGGACCCTC TCCAAGGTTT CTGTGGCGAT TCTGGTGGAC
GGCAAGTATG ATGCTGCCGC AGCCGGCAAG GACGGGAAAG AGGCAAAACC CAAGTACACG
CCCCGTTCGC CGGACGAACT CCAGAAGATC GATGCGCTGG TGAAAAGCTC GGTCGGCTTC
AATGTCGAGC GGGGCGATCA GGTGACGGTC GTCAATATAC CGTTCCAGGA TACGGGTGAT
GTCGGGGCTG GTGAGGCCGA CAAATGGTGG AACGCCCCCA TTTTCCTTTC CCTGCTGAAG
AACGGCCTGA TCGGCTTCGG CTTCCTGGCG CTCCTCCTTT TCGTGGTGCG GCCGCTCCTG
AAGACCCTCA AGCCGGAAAA GAGCACGAGC TTCGAGCCGA TCCCCTCGGC CGAGGATGCC
CTCAACCAGA TTGCAGAGAT CCATCGGTTG CAGATCGGCA ACCAGACCGT GAGCCAGATG
GAGCTCATCA ACAAGATCAA GCAGGAACCC TATCAAGCGG CCCAGATCAT TCAGAACTGG
CTGCGAGACA AGGGTGAGGA ATAG
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| Protein sequence | MPEALNKLIQ PFMALPPAKR WVVGGVVGLS VIAFTILILV ANRTDYRPLF TNLTSEDAGE
IVTKLKEQKV PYRIAADGKA ILVPSDKVYD LRLSLASDGL PQGGGVGFEI FDRKNFGMTD
FVQKLNYQRA LQGELSRTIS QISGVEQARV HLVIPEKSLF KEDEKPATAS VVLKVKGQRQ
LRENDVQGIV HLVASAIEGM NPEHVTVLDQ KGKLLSKNTP GDAAGKMTAS MQEVQRAYER
STEERLQSLL DKAVGAGKSV ARVSAVFDFR QVERYEEKYD PETVVRSEQR SEEKQDGSTV
TGGVPGVQTN LGRTAGQPAG TSGGGSKNDE TLNYEVSRAT ARTIEPVGTL SKVSVAILVD
GKYDAAAAGK DGKEAKPKYT PRSPDELQKI DALVKSSVGF NVERGDQVTV VNIPFQDTGD
VGAGEADKWW NAPIFLSLLK NGLIGFGFLA LLLFVVRPLL KTLKPEKSTS FEPIPSAEDA
LNQIAEIHRL QIGNQTVSQM ELINKIKQEP YQAAQIIQNW LRDKGEE
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