Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0360 |
Symbol | |
ID | 2686665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 391444 |
End bp | 392733 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637125025 |
Product | OmpA domain-containing protein |
Protein accession | NP_951419 |
Protein GI | 39995468 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00108723 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAC GAATCGTGCC CGGACTGCTT GCCTTGGCCG CGATAGCCGT CACGGCCGCG CCAACACTCG CCGAAAACAG GAGCGGAGCA GGGTACATCT CTCCCTTTGT GGGCGGCTAC ACGTTTGACG GCGCACAACA CCTGAAAACC CGTCCGACTT TCGGCCTGAG AGGCGGCTAC AACCTGGACA AGAACTGGGC CGCTGAACTG CTCTTCGGGT ATGTCCCCAC CAAGCAGAGC AGGGGGCAGG GAAATGACGC GGATGCTTAC CGTTACGGTC TCGACGTCCT CTATAACTTC ATGCCCGACA GCGCTCTGGT GCCGTTCCTC GCCGTAGGCG GCGGCGCATC CACCATCGAT CACTCCGAAG GGGTGAGCGA CGAGCACGAG CAGTATGTGA ACTACGGTGG CGGCCTCAAA TACTTCCTGA CCGATAATTT CGCACTTCGT GGCGACGTGC GGCACATCTA CATGCTCGGC CCCGAAAACC ACAATTTTGA GTACACGGTG GGACTCAACT ACCTCTTTGG CGGTGAGCGC CCCGCGCCGG CCAAGGTTGC TGCACCTCCC GAGCCGCCTA AGGCCGTCGA GCCCCCGCCT CCGGCCCCCG CGCCCAAGAA AGAGATTGCA CCGCCTCCTC CGCCTCCGGC TCCTGCACCC AAGGATACGG ACGGTGACGG GGTAATCGAT GACCTGGACA AGTGCCCCGA TACCCCTGCG GGCGTGAAGG TCGATAGTGT CGGTTGTCCT CTCGATACGG ACAAGGACGG CGTTTACGAT TACCTGGACA AGTGCCCCGG CACCCCTGCC GGCGTGAAGG TGGACAGCGT TGGTTGTCCT CTCGATACTG ACGGCGACGG CGTCTATGAC TATCTGGACA AGTGCCCCGA CACGCCCAAG GATCTGGCGG TCGACGCAAA AGGTTGCCCC GAGCGCATCT GCATCACTCT CGGCGTTCAG TTTGACACCG ACAAGGCCGT GGTCAAGCCT CAGTACAATG ATGAGATCAA GAAGGCCGCC GACTTCCTGA AAGAGTACCC CGACGCGACC GCCGTCATTG AAGGGCACAC CGACAGCGTC GGAAGCGATG CTTACAATCA GAAGCTTTCG GAGCGGCGTG CCAAGGCGGT CATGAAGTAT CTGGTCGACA AGTTCGGTAT CAGCGCCAAG CGTCTCTCGG CCAAGGGCTT CGGCGAGTCC AAGCCGATTG CCGACAACGC TACCGAAGAA GGTCGGTACA AGAACCGCCG GGTTGTGGCG GTCATCGACT GCGGTATGAA GAAACGCTGA
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Protein sequence | MKQRIVPGLL ALAAIAVTAA PTLAENRSGA GYISPFVGGY TFDGAQHLKT RPTFGLRGGY NLDKNWAAEL LFGYVPTKQS RGQGNDADAY RYGLDVLYNF MPDSALVPFL AVGGGASTID HSEGVSDEHE QYVNYGGGLK YFLTDNFALR GDVRHIYMLG PENHNFEYTV GLNYLFGGER PAPAKVAAPP EPPKAVEPPP PAPAPKKEIA PPPPPPAPAP KDTDGDGVID DLDKCPDTPA GVKVDSVGCP LDTDKDGVYD YLDKCPGTPA GVKVDSVGCP LDTDGDGVYD YLDKCPDTPK DLAVDAKGCP ERICITLGVQ FDTDKAVVKP QYNDEIKKAA DFLKEYPDAT AVIEGHTDSV GSDAYNQKLS ERRAKAVMKY LVDKFGISAK RLSAKGFGES KPIADNATEE GRYKNRRVVA VIDCGMKKR
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