Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0337 |
Symbol | hemL |
ID | 2687321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 366273 |
End bp | 367556 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637125003 |
Product | glutamate-1-semialdehyde aminotransferase |
Protein accession | NP_951397 |
Protein GI | 39995446 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00652219 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCACAG CTCGCTCGAA GGATCTTTTC ACGCAAGCCC AGGAATTCAT TCCCGGTGGA GTAAACAGTC CCGTACGCGC CTTCAAGTCA GTGGGCGCCG ACCCTCTTTT CATTAAAAAA GCGTTTGGTT GCACAATTAC TGACGCCGAC AACAACAGTT ATATCGATTA CGTCGGCTCC TGGGGCCCCA TGATTCTCGG CCACTGCCAC CCCCAGGTTG TCGAAGCCGT AAAGCGGGCC GTCGAAAGTG GCAGCAGCTT TGGCGCCCCC ACGGAGCTGG AAATCACCCT TGCCCGAATG GTCATCGACG CGGTGCCCTC AATCGAGATG GTTCGTATGG TCAGCTCCGG AACAGAGGCG ACCATGAGTG CCATTCGGCT TGCCCGCGGC TACACCGGCC GGGATAAAAT CATCAAATTC TCAGGCTGCT ATCATGGCCA TGCCGACGCA CTCCTGGTGA AGGCTGGCTC AGGGGCTGCC ACGTTTGGGG TGCCCGATTC GCCGGGAGTT CCCGTCGATG TGGCAAAAAA CACGCTCACT GCTCAGTTCA ACGATCTTGA TTCGGTTTCG AAGCTTATTG ATGAGAACAA GAATGAGATC GCGTGCATCA TTGTCGAGCC TATTGCCGGT AATATGGGCA CCGTTCCGCC GGGTGAAGGT TTTCTCGAAG GGCTCCGCTC CATCTGCGAC AGCGAGGGAA TTGTCCTCAT TTTCGACGAG GTAATGACCG GCTTCCGTGT TGCCTATGGT GGAGCTCAGG AACTTTACGG TGTAACTCCC GACATGACCA CCCTCGGCAA GATCATCGGC GGTGGGCTTC CCGTCGGCGC CTTCGGCGGC AAAAAGGACA TCATGAAGCT TCTCTCCCCG TCCGGAGGCG TTTATCAGGC GGGCACGCTG TCGGGCAACC CCCTCGCCAT GACAGCTGGT ATCGAGACCC TCAAACTGCT TCAGGCAGAC GGGTTCTATG AGCAACTGGA GCAAACGAGC CGCCGCCTTG CCGAGGGCAT CACCGAGGCG GCCAAATCCG CCGGGTACCC CATCTATCCG ACCCGCGTCG GCAGCATGTT CTGCACCTTT TTCACCAGCA ACGAGGTCAA GGACTGGCCC ACGGCCACAA CCTGCGACAC AAAGGCATTC GCCGCTTTTT TCAGAATGAT GCTCGAGAAG GGGATCTATC TGGCTCCTTC GCAGTTTGAA ACGGCCTTCG TCTCGATCGC CCACACCGAG GTGGAAATCG AGAAGACGAT TGTTGCGGCC CGCTCATGCT TTGCCGCTCT CTAA
|
Protein sequence | MLTARSKDLF TQAQEFIPGG VNSPVRAFKS VGADPLFIKK AFGCTITDAD NNSYIDYVGS WGPMILGHCH PQVVEAVKRA VESGSSFGAP TELEITLARM VIDAVPSIEM VRMVSSGTEA TMSAIRLARG YTGRDKIIKF SGCYHGHADA LLVKAGSGAA TFGVPDSPGV PVDVAKNTLT AQFNDLDSVS KLIDENKNEI ACIIVEPIAG NMGTVPPGEG FLEGLRSICD SEGIVLIFDE VMTGFRVAYG GAQELYGVTP DMTTLGKIIG GGLPVGAFGG KKDIMKLLSP SGGVYQAGTL SGNPLAMTAG IETLKLLQAD GFYEQLEQTS RRLAEGITEA AKSAGYPIYP TRVGSMFCTF FTSNEVKDWP TATTCDTKAF AAFFRMMLEK GIYLAPSQFE TAFVSIAHTE VEIEKTIVAA RSCFAAL
|
| |