Gene GSU0308 details

Gene Information

• Locus tag: GSU0308
• Symbol: hypD
• ID: 2686961
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 340904
• End bp: 341995
• Gene Length: 1092 bp
• Protein Length: 363 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637124974
• Product: hydrogenase expression/formation protein HypD
• Protein accession: NP_951368
• Protein GI: 39995417
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0409] Hydrogenase maturation factor
• TIGRFAM ID: [TIGR00075] hydrogenase expression/formation protein HypD

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTACC AGGACGAGTT TCGCGATCGG GCCCTGGTGC AGGGGTATGC GCAGCGCATC 
GCCCGGTTGG TGGAGGGACG CACGGACGTC ATGACCTTCA TGGAGGTCTG CGGCACCCAC 
ACCATGTCGA TCTACCAGTA CGGCCTCCGC AGCCTCCTGC CGCCCCAGGT GCGGCTCATC 
TCCGGCCCGG GCTGCCCCGT CTGCGTGACC CCCAACGAAT ACCTGGACCG GGCCGTGGCC 
CTCTGCCGTC TCCCCGGTGT CATCGTCGCC ACCTTCGGCG ACATGGTCCG GGTGCCGGGC 
TCCTCCTCGT CGCTCCAAGA GGAGCGGGCC ATGGGGGCAG ACGTGCGCAT CGTCTATTCC 
CCGCTCGACG CCGTTGCCCT GGCGGCGGCG AATCCGGACC GGAAAGTGGT TTTTCTCGGG 
GTTGGTTTCG AAACCACGGC TCCGGCCATC GGCGGAAGCA TTCTCGCGGC CCGGAAGCAG 
GGGCTTGCCA ACTACTTCGT CCTGGCTGCC CACAAGACCA TGCCGATCCC CATGCGTGTT 
CTGGCCAATG ACCCCGAGCT CGGCATCGAC GGCTACCTGT GCCCGGCCCA CGTCAGCACT 
ATAATCGGTG CCGACGCGTA CCGCTTCCTT CCCGAGGAGT TCGGCATCCC CTGTGTGGTA 
ACGGGCTTCG AGCCGGTCGA CGTCATGCAG GGGGTGGAGA TGCTTGTCCG CCAGGTCGTG 
GAGGGAAAGC CCCGGGTCGA GATCCAGTAC AGCCGTGTGG CCACCTGGGA GGGGAACCGC 
AAGGCCCTGG ACGTACTCGC CCAGGTATTC ACTCCCTTTG ACGCACCCTG GCGGGGGATC 
GGCATCATTC CGGGAAGTGG CCTCCGGATC GCCGATGCCT ACGCCGCCTT CGACGCCGAG 
CGGGAGATCG CGGTGGAGGT CGAAGAGACC AAAGAGCACC AGGGGTGTCT CTGCGGGGAG 
ATCCTCAAGG GGAAAGTGAC ACCCTTCGAC TGTCCCCTGT TTGCCAACGC CTGCACCCCC 
GAGTCGCCCG TGGGCGCCTG CATGGTTTCC AGCGAGGGGA CCTGCGCGGC GGCCTACAAG 
TACGGGCAAT AA 

 

Protein sequence

MNYQDEFRDR ALVQGYAQRI ARLVEGRTDV MTFMEVCGTH TMSIYQYGLR SLLPPQVRLI 
SGPGCPVCVT PNEYLDRAVA LCRLPGVIVA TFGDMVRVPG SSSSLQEERA MGADVRIVYS 
PLDAVALAAA NPDRKVVFLG VGFETTAPAI GGSILAARKQ GLANYFVLAA HKTMPIPMRV 
LANDPELGID GYLCPAHVST IIGADAYRFL PEEFGIPCVV TGFEPVDVMQ GVEMLVRQVV 
EGKPRVEIQY SRVATWEGNR KALDVLAQVF TPFDAPWRGI GIIPGSGLRI ADAYAAFDAE 
REIAVEVEET KEHQGCLCGE ILKGKVTPFD CPLFANACTP ESPVGACMVS SEGTCAAAYK 
YGQ