| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0264 |
|---|
| Symbol | |
|---|
| ID | 2687145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter sulfurreducens PCA |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002939 |
|---|
| Strand | - |
|---|
| Start bp | 270803 |
|---|
| End bp | 272038 |
|---|
| Gene Length | 1236 bp |
|---|
| Protein Length | 411 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637124930 |
|---|
| Product | Bcr/CflA subfamily drug resistance transporter |
|---|
| Protein accession | NP_951325 |
|---|
| Protein GI | 39995374 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA CCTCCACGGC CCCGGCGTTC CAGCCGGCCG ACATGACCCG GCGCGAACTG
GCGCGACTGG TCCTCATCCT GGGTGCGCTG ACCGCTTTCA GCTCCATGTC CATCGACATG
TACCTTCCCG CCTTCCCGCA GATCGCCCGG GACCTCGGCG TGCCACTCGG AACGGTGCAG
CTCTCCATCT CCGCCTTCCT GTTCGGCTCG GCCGCGGGGC AGCTCGTGTA CGGTCCGCTG
GCCGACCGGT GGGGCAGGCG AACCCCTCTC CTCGGGGGAC TGGCCCTCTA TGTGGCGGCA
GCCTTCGGAT GCGCCGCCGT CCACACGGGG GAGGGGCTGC TCTTCTGGCG GGTGGTTATG
GCGCTGGGAG GCGGGGCCGG CATGGTGATC TCCCGCGCCG TGGTGCGTGA TCTCTACGAC
ACCGCCGAGG CGGCGAGGAT GTTTTCACTT CTCATGCTGG TCATGGGGGC CGCGCCGATC
CTGGCCCCAA TCGCGGGGGG ACAACTCCTG CTGATCACCG GCTGGCGGGG GATTTTCGGT
TTTCTGGGGA TCTTCGGCAT TCTCTCTCTC GCCGCGGCAG CGGCATGCCT TCCCGAGTCG
CTGCCGCCCG AACGGCGGAG CACGCGCGGT GTCGCCGAAA TGGCCGCCAT CTACGGCCAT
CTGCTCCGCA ACCGCCGCTA CCTCCGCTAT GCCATCGCCC TGGGCTGCGT CGCCGGGGTC
AACTTCTCCT ACATCTCAGG CTCCCCGTTC GTCTTCATCG AGCTGAACGG CGTCTCTCCC
CAGCAGTTCG GCCTTTTCTT CGGGGCCAAC GCCTTCGGCC TGATCGGCGC ATCCCAGGTG
AACCGCCGGC TCCTGCGACG CTTCAGCGCC CAACGGATTC TCAACGTCGC GTTCACCGTC
AACGCAGCGG CGGCCCTGCT CCTCACGGTG GCGGGATTCA CGGGGGTGGG CGGCTTCCCG
GCCCAGGTCG TCCTTCTGTT CGTGTGCCTC TGCATGACCG GATTTCTCTA TCCCAACGTG
ACGGCCCTCG CCATGGCCCC CTTCGACAAG GCGGCAGGGA GTGCATCGGC GCTTCTGGGA
ACGATCCAGT ACACCCTGGG GGCAAGCGCG GGGGCTCTGG TTGGGATGCT CCACAACGGA
ACTGCGGTGC CGATGACCGC TGCCATGGCG GCCTGCGGGC TGCTGGGCTG GTGTGCCGCC
GTGGCCGGAA TCCCTCGCGC CCAAGTCGAC CACTGA
|
|---|
| Protein sequence | MEITSTAPAF QPADMTRREL ARLVLILGAL TAFSSMSIDM YLPAFPQIAR DLGVPLGTVQ
LSISAFLFGS AAGQLVYGPL ADRWGRRTPL LGGLALYVAA AFGCAAVHTG EGLLFWRVVM
ALGGGAGMVI SRAVVRDLYD TAEAARMFSL LMLVMGAAPI LAPIAGGQLL LITGWRGIFG
FLGIFGILSL AAAAACLPES LPPERRSTRG VAEMAAIYGH LLRNRRYLRY AIALGCVAGV
NFSYISGSPF VFIELNGVSP QQFGLFFGAN AFGLIGASQV NRRLLRRFSA QRILNVAFTV
NAAAALLLTV AGFTGVGGFP AQVVLLFVCL CMTGFLYPNV TALAMAPFDK AAGSASALLG
TIQYTLGASA GALVGMLHNG TAVPMTAAMA ACGLLGWCAA VAGIPRAQVD H
|
|---|
| |