Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0255 |
Symbol | |
ID | 2686830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 263840 |
End bp | 265690 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637124921 |
Product | sensory box histidine kinase |
Protein accession | NP_951316 |
Protein GI | 39995365 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGGCA GCAATCAGAA TGTAGCGTTA CGGATTACTG CGATCTATGC GCTCGTCGGC GTGTCATGGA TTCTCTTTTC CGATTGGCTG CTCTATCTCG CGGTTGGCGA CCCTCATCTC CTCACGCGAC TCCAGATGGG AAAGGGATGG GTGTACGTGG CCGCGACCGC CATGCTCCTC TACTGGCTCG TCCACCGGGA TACGGCGCAG ATCAGTCGCT CCGAGGAAGA TCTCCGGGTG CGGAATGAAG AACTGACCGT GGTAGAGGAG GAACTCAGGC AGCAAAACGA AGAACTGATC GTGGCCGAGG AAGAACTTCG GCAGCAGCTG ACCGAGAACT ACGAGAGCCA GAAAAAATTG TTCGAGGCAC ATCAGGCAAT GGCAGCCATC CTCCAGGCGT CACCGGTCGC CATCGTGGCG CTTGACAGGG AAGACAAGGT CGTGGTGTGG AACCGTGCCG CCGAGCGCCT CTTCGGCTGG CTTGAGGGGG AGGTTCGGGG GACGCCCTTT TCCCTGCTCC ACCCCGACGA CACGAAAGAT GAGGAGCGGG TCTGCGGGAG CGCCTGCCAG GAGGCGGTCC TGCACGATAT CGAAGGCGTG CGCATGAAGA AAAACGGAGA GTTGATCAGT GTCAGCATCT CCACTGCGCC ACTGCACGAT CCTGCCGGGC TGAACGCCGG CGTGATCGCA ATGTTCACCG ACATCACCGA CCGCAAGTCT GCGGCTAAAA GTCTCAGAAA AAGCAACGAA AAGTATGTCG AACTGGTCAA TGCCATCAGC GGCATCGTCT GGGAGCTTGA CGTCGAGAGT TTTTGTTTCA CGTTTGTCAG CCGGAGGTCA GAGGATATCC TGGGCTATCC CGCCGAGGCA TGGCTGGCCG AGCCGGGGTT CTGGGAGCGC TGCATCCACC CCGACGACCG CGCGTGGGTG CTTGCCGCCT GCCGCACGGC GCATGGCGAG GGAACCAGCC ATGAGTTGGA GTATCGCGGA CTCGCCGCCG ATGGCCACAT TATCTGGCTG CGGAACTCAT TCGTGGTTGT CGAGGACACG AACGGCCACG TGAAGCTCCG CGGGGTCATG ACCGATATCA GCCGGCGAAA GAATGCCGAG GATGAACTGT CCAGACTCAA TGCCGAGCTC GAACAACGGG TGGCGCAGCG AACGTCGGAG TTGGCGGCAC TCAACCGGGA ACTGGAAGCC TTCAGCTATA CGGTTTCCCA CGATTTGCGG GCCCCCCTGC GCCACATCGA AGGGTTCGGC AGGGCTCTTC AGGAGGATTA CTACGAGGCC TTTGACGATA CGGGGAAATT ACACTTGGCC CGGCTCTGTT CGGCAGCCAG AAAGATGGGG CAACTGATCG ACGATCTGCT CCGCCTTGCC ATGGTCAGCA AGGGGGAAAT CAACCGGCGT CCCACCAATC TCAGCACGAT CGCACATGGC ATTGTGCAGG ATCTGACGCT GTCTCAGCCG GAGCGCGCGG TTGCATTCCG GATAACCGAC GGGATCGAGG TGAACGGCGA TCCCCGGCTG CTGCAAGTCG TTATGGAGAA TCTCCTCAGC AATGCATGGA AATACACGGG GAAGCGGCAG GATGCCGTTA TAGAGTTCGG TGTGGGCGAG GATCGGGGGC GAACGGTCTT CTTTGTCAGG GACAACGGAG TTGGCTTTGC CAATGAACAT GCCGAAAAAA TCTTCAAGCC GTTCCTGAGG CTCCACAGCG CGGAGGACTA TGAGGGGTCG GGCGTTGGTC TGGCAACGGT GCGCCGTGTC GTGGAGCGCC ATGGGGGGCG TGTGTGGGCG CAGGGCCGGG AAGGGCACGG CGCCGTGTTC TTCTTTACTC TGGATAACTG A
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Protein sequence | MAGSNQNVAL RITAIYALVG VSWILFSDWL LYLAVGDPHL LTRLQMGKGW VYVAATAMLL YWLVHRDTAQ ISRSEEDLRV RNEELTVVEE ELRQQNEELI VAEEELRQQL TENYESQKKL FEAHQAMAAI LQASPVAIVA LDREDKVVVW NRAAERLFGW LEGEVRGTPF SLLHPDDTKD EERVCGSACQ EAVLHDIEGV RMKKNGELIS VSISTAPLHD PAGLNAGVIA MFTDITDRKS AAKSLRKSNE KYVELVNAIS GIVWELDVES FCFTFVSRRS EDILGYPAEA WLAEPGFWER CIHPDDRAWV LAACRTAHGE GTSHELEYRG LAADGHIIWL RNSFVVVEDT NGHVKLRGVM TDISRRKNAE DELSRLNAEL EQRVAQRTSE LAALNRELEA FSYTVSHDLR APLRHIEGFG RALQEDYYEA FDDTGKLHLA RLCSAARKMG QLIDDLLRLA MVSKGEINRR PTNLSTIAHG IVQDLTLSQP ERAVAFRITD GIEVNGDPRL LQVVMENLLS NAWKYTGKRQ DAVIEFGVGE DRGRTVFFVR DNGVGFANEH AEKIFKPFLR LHSAEDYEGS GVGLATVRRV VERHGGRVWA QGREGHGAVF FFTLDN
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