Gene GSU0255 details

Gene Information

• Locus tag: GSU0255
• ID: 2686830
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 263840
• End bp: 265690
• Gene Length: 1851 bp
• Protein Length: 616 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637124921
• Product: sensory box histidine kinase
• Protein accession: NP_951316
• Protein GI: 39995365
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2202] FOG: PAS/PAC domain; [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase)
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGGCA GCAATCAGAA TGTAGCGTTA CGGATTACTG CGATCTATGC GCTCGTCGGC 
GTGTCATGGA TTCTCTTTTC CGATTGGCTG CTCTATCTCG CGGTTGGCGA CCCTCATCTC 
CTCACGCGAC TCCAGATGGG AAAGGGATGG GTGTACGTGG CCGCGACCGC CATGCTCCTC 
TACTGGCTCG TCCACCGGGA TACGGCGCAG ATCAGTCGCT CCGAGGAAGA TCTCCGGGTG 
CGGAATGAAG AACTGACCGT GGTAGAGGAG GAACTCAGGC AGCAAAACGA AGAACTGATC 
GTGGCCGAGG AAGAACTTCG GCAGCAGCTG ACCGAGAACT ACGAGAGCCA GAAAAAATTG 
TTCGAGGCAC ATCAGGCAAT GGCAGCCATC CTCCAGGCGT CACCGGTCGC CATCGTGGCG 
CTTGACAGGG AAGACAAGGT CGTGGTGTGG AACCGTGCCG CCGAGCGCCT CTTCGGCTGG 
CTTGAGGGGG AGGTTCGGGG GACGCCCTTT TCCCTGCTCC ACCCCGACGA CACGAAAGAT 
GAGGAGCGGG TCTGCGGGAG CGCCTGCCAG GAGGCGGTCC TGCACGATAT CGAAGGCGTG 
CGCATGAAGA AAAACGGAGA GTTGATCAGT GTCAGCATCT CCACTGCGCC ACTGCACGAT 
CCTGCCGGGC TGAACGCCGG CGTGATCGCA ATGTTCACCG ACATCACCGA CCGCAAGTCT 
GCGGCTAAAA GTCTCAGAAA AAGCAACGAA AAGTATGTCG AACTGGTCAA TGCCATCAGC 
GGCATCGTCT GGGAGCTTGA CGTCGAGAGT TTTTGTTTCA CGTTTGTCAG CCGGAGGTCA 
GAGGATATCC TGGGCTATCC CGCCGAGGCA TGGCTGGCCG AGCCGGGGTT CTGGGAGCGC 
TGCATCCACC CCGACGACCG CGCGTGGGTG CTTGCCGCCT GCCGCACGGC GCATGGCGAG 
GGAACCAGCC ATGAGTTGGA GTATCGCGGA CTCGCCGCCG ATGGCCACAT TATCTGGCTG 
CGGAACTCAT TCGTGGTTGT CGAGGACACG AACGGCCACG TGAAGCTCCG CGGGGTCATG 
ACCGATATCA GCCGGCGAAA GAATGCCGAG GATGAACTGT CCAGACTCAA TGCCGAGCTC 
GAACAACGGG TGGCGCAGCG AACGTCGGAG TTGGCGGCAC TCAACCGGGA ACTGGAAGCC 
TTCAGCTATA CGGTTTCCCA CGATTTGCGG GCCCCCCTGC GCCACATCGA AGGGTTCGGC 
AGGGCTCTTC AGGAGGATTA CTACGAGGCC TTTGACGATA CGGGGAAATT ACACTTGGCC 
CGGCTCTGTT CGGCAGCCAG AAAGATGGGG CAACTGATCG ACGATCTGCT CCGCCTTGCC 
ATGGTCAGCA AGGGGGAAAT CAACCGGCGT CCCACCAATC TCAGCACGAT CGCACATGGC 
ATTGTGCAGG ATCTGACGCT GTCTCAGCCG GAGCGCGCGG TTGCATTCCG GATAACCGAC 
GGGATCGAGG TGAACGGCGA TCCCCGGCTG CTGCAAGTCG TTATGGAGAA TCTCCTCAGC 
AATGCATGGA AATACACGGG GAAGCGGCAG GATGCCGTTA TAGAGTTCGG TGTGGGCGAG 
GATCGGGGGC GAACGGTCTT CTTTGTCAGG GACAACGGAG TTGGCTTTGC CAATGAACAT 
GCCGAAAAAA TCTTCAAGCC GTTCCTGAGG CTCCACAGCG CGGAGGACTA TGAGGGGTCG 
GGCGTTGGTC TGGCAACGGT GCGCCGTGTC GTGGAGCGCC ATGGGGGGCG TGTGTGGGCG 
CAGGGCCGGG AAGGGCACGG CGCCGTGTTC TTCTTTACTC TGGATAACTG A 

 

Protein sequence

MAGSNQNVAL RITAIYALVG VSWILFSDWL LYLAVGDPHL LTRLQMGKGW VYVAATAMLL 
YWLVHRDTAQ ISRSEEDLRV RNEELTVVEE ELRQQNEELI VAEEELRQQL TENYESQKKL 
FEAHQAMAAI LQASPVAIVA LDREDKVVVW NRAAERLFGW LEGEVRGTPF SLLHPDDTKD 
EERVCGSACQ EAVLHDIEGV RMKKNGELIS VSISTAPLHD PAGLNAGVIA MFTDITDRKS 
AAKSLRKSNE KYVELVNAIS GIVWELDVES FCFTFVSRRS EDILGYPAEA WLAEPGFWER 
CIHPDDRAWV LAACRTAHGE GTSHELEYRG LAADGHIIWL RNSFVVVEDT NGHVKLRGVM 
TDISRRKNAE DELSRLNAEL EQRVAQRTSE LAALNRELEA FSYTVSHDLR APLRHIEGFG 
RALQEDYYEA FDDTGKLHLA RLCSAARKMG QLIDDLLRLA MVSKGEINRR PTNLSTIAHG 
IVQDLTLSQP ERAVAFRITD GIEVNGDPRL LQVVMENLLS NAWKYTGKRQ DAVIEFGVGE 
DRGRTVFFVR DNGVGFANEH AEKIFKPFLR LHSAEDYEGS GVGLATVRRV VERHGGRVWA 
QGREGHGAVF FFTLDN