| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0229 |
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| Symbol | alkK |
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| ID | 2687728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 236228 |
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| End bp | 237880 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637124895 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | NP_951290 |
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| Protein GI | 39995339 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.285921 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATA CCCTGATACC CCGCACCCCC TCAGCCTACG ACTATCCCCT GCTCATCAAG
AGCCTGCTCC GCAATCCCGT GGTCGACAAC CCCGACCAGG AAATCGTCTA CCGGGGCGTG
ATCCGCCACA CCTACCGCGA TCTGCGCGAG CGGGTCCGGC GCCTGGCCAA TGTTCTCACG
GGCCTGGGGG TCAAGGCGGG CGATACCGTG GCGGTCATGG ATTGGGACAG CCACCGCTAC
CTGGAGCTTT TCTTCGCGGT GCCCATGATC GGCGCAGTGC TCCATACCAT CAACGTCCGC
CTCTCCCCGG AGCAGATCCT CTATACCATC GACCATGCCG AGGACGATCT GCTGCTGGTG
AACAGCGAAT TCCTCCCCAT TCTGGAGCAG ATCCGGGGCA GGATCGACAC GGTGCGGGGG
TATGTGCTCC TCACCGACGA GGAAAAGATG CCCGAGAGCC ACATCCCCTT TGTGGGTGAG
TACGAGGCGC TCCTGGCCGC GGCCTCAGGC GAGTACGATT TTCCCGATTT CGATGAGAAC
ACCCGGGCAA CCACCTTCTA CACCACCGGG ACCACCGGCC TCCCCAAGGG GGTCTACTTC
AGCCACCGCC AACTGGTGCT CCACACCATG GGAGTTATGG CGTCCCTGGG GACGGTCTTC
GCCCATGGCC GCCTCCACCA GGGGGATGTC TACATGCCGA TCACCCCCAT GTTCCATGTC
CACGCCTGGG GCGTGCCCTA TCTGGCCACC ATGCTCGGCA TCAAACAGGT CTATCCGGGG
CGCTACTCGC CCGATCTGCT CCTGGACCTC ATCGAAAAGG AACGGGTCAC CTTTACCCAC
TGTGTCCCCA CCATCCTTCA TATGCTCCTC AAGCATCCCC ATGCCAAGCG GGTCGACCTG
GCGGGATTGA AGATGATCAT CGGCGGGGCC GCCATGTCCC GGGCCCTCTG CTGCGAGGCG
CTGGAGCGCG GTATCGACGT TTTCACCGGC TACGGCATGT CCGAGACCTG CCCCATTCTG
ACCTTCTCAC GTCTCACGCC TGAAATGCTG GCGGGAAGCC CGGCCGAGCA GGCCGAGGTC
CGCTGCCTCA CGGGGCTGTC GCTGCCGTTC GTGGACCTGC GGGTGGTGGA TCCGGAAACC
GGGGCAGAGC AGCCTCGGGA CGGCCGGAGC GCCGGCGAGA TCGTGGTGCG CGCCCCCTGG
CTGACCCAGG GGTACCTGAA GGACCACCGT ACCTCGGAAA AGCTCTGGGA GGGAGGCTTT
CTCCATACCG GTGACGTGGC GGTGCGGGAC GAACGGGGAT ACGTACGGAT TACCGACCGG
ACCAAAGACG TGATCAAGGT GGCGGGAGAA TGGGTCTCTT CACTGGAGTT GGAGGATATC
CTGGCTCATC ATCCCGCCGT GGCCGAAGTG GCGGTCATCG GCCAGCCCGA CGAGAAATGG
GGGGAGCGCC CCCTGGCCCT GGTGGTGCTG AAGCCCGAGG AGGCCGGCCG GGTGGGGGAA
AAGGACCTGG CGCATTTTGT CCGGGAATAC GCCGACAAGG GGATGGTCAG CAAGCAGGTG
GTCCTGCTGA AAGTGCGGCT CGTGGATGCC ATCGACAAGA CGAGCGTGGG CAAGATCAGC
AAAGTGACCC TGCGGGAGAA GTACCTGGCA TAG
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| Protein sequence | MTDTLIPRTP SAYDYPLLIK SLLRNPVVDN PDQEIVYRGV IRHTYRDLRE RVRRLANVLT
GLGVKAGDTV AVMDWDSHRY LELFFAVPMI GAVLHTINVR LSPEQILYTI DHAEDDLLLV
NSEFLPILEQ IRGRIDTVRG YVLLTDEEKM PESHIPFVGE YEALLAAASG EYDFPDFDEN
TRATTFYTTG TTGLPKGVYF SHRQLVLHTM GVMASLGTVF AHGRLHQGDV YMPITPMFHV
HAWGVPYLAT MLGIKQVYPG RYSPDLLLDL IEKERVTFTH CVPTILHMLL KHPHAKRVDL
AGLKMIIGGA AMSRALCCEA LERGIDVFTG YGMSETCPIL TFSRLTPEML AGSPAEQAEV
RCLTGLSLPF VDLRVVDPET GAEQPRDGRS AGEIVVRAPW LTQGYLKDHR TSEKLWEGGF
LHTGDVAVRD ERGYVRITDR TKDVIKVAGE WVSSLELEDI LAHHPAVAEV AVIGQPDEKW
GERPLALVVL KPEEAGRVGE KDLAHFVREY ADKGMVSKQV VLLKVRLVDA IDKTSVGKIS
KVTLREKYLA
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