| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0189 |
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| Symbol | dbpA |
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| ID | 2687824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 201957 |
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| End bp | 203339 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637124855 |
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| Product | ATP-dependent RNA helicase DbpA |
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| Protein accession | NP_951250 |
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| Protein GI | 39995299 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCCGA AAGCATTTTC GTCGCTTCGC CTGAAAGCCC CCATGCTCAG GAACCTGGCC
TCCCTCGGCT ATGCCGAGAT GACACCGATT CAGGCCCACA GCCTGCCGCT CATCCTGGCC
GGCAAGGATG TGATCGCCAG GGCCAAGACC GGTAGCGGCA AGACCGCGGC TTTTGGCATC
GGACTGCTGT CGCGTCTGGA TGCATTATCC TTCCGGGTGC AGGCGTTGGT GCTCTGCCCG
ACCCGTGAGC TGGCCGATCA GGTGGGCAAG GAACTGCGGC GTCTGGCTCG ATTCACCGAC
AACATCAAGA TCTTGACCAT CTGTGGCGGT GTTCCCTTCG GGCCCCAGCT GGGTTCGCTG
GAGCATGGGG CCCATGTGGT GATAGGCACA CCCGGCCGCC TGCTGGATCA CTTGCGGCGC
GGCAGCCTTG ACCTCTCCGC GCTGCGGACC CTGGTATTGG ACGAGGCGGA CCGGATGCTC
GACATGGGGT TCCAGGATGA CATCAGTGCC CTGATCGCCG CCGCCCCGCC CAAGAGGCAG
ACTCTCCTCT TTTCCGCCAC CTACCCGGAC TCCATTGCCG CCATGAGCGC CGGGGTCCAG
AGGGAGCCGG TGGAGGTCAG CGTGGACGAG GTCCATGGGG AGGGGGCCAT CGAGCAGGTA
TTCTACGAGG TGGACAGCGG CCAGCGGATC GAAGCGGTCG AGCGGATTCT CGGGCACTAT
CGTCCCGAGT CTGCTCTCAT CTTCTGCAAC ACGAAGCTGG AGTGCCAGGA GGTGGCCAAT
GCCCTGGCCG TCCGGGGGTA TGCCGCACTG GCCATCCATG GTGACCTGGA CCAGCGGGAG
CGGGACCGGG TGCTGGTCCG GTTTGCCAAC AGGAGCGCAT CGGTGCTGGT AGCAACCGAC
GTTGCCGCCC GGGGGCTGGA CATCAAGGAG CTTTCGGCGG TGATTAACTA CGAGTTGACC
CGCAATCCGG AGGTCCATAC CCACCGCATC GGCCGCACCG GTCGCGCCGG GGAGCGGGGG
CTGGCCGTAA GCTTGGTAAC GCCCCGGGAA AGCCGTCTGA TTGCAGCCAT CGCGGATGTG
CCCGGCAGCA TTATCGCCCG TGGCGACCTG TCCACGCTGG CACCGCTAAC GGCGAAGCCG
CCGCTGCCCC CCATGGTGAC GCTCTGCATC GACGGGGGCC GCAAAAACAA GCTGCGGCCC
GGTGATATTC TGGGGGCACT CACCGGAGAG GGAGGTATGC CGGCCAGCGA GGTGGGGAAG
ATTGATGTGT TCGATTTCTT TACCTACGTG GCCATTGCGC GGCAGAGCAG TGAGCAGGCC
TTGAACTTTC TGAGGGGACA CAGGATCAAG GGGCGTTTCT TCAAGGTGAG GAAAGCAGTC
TGA
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| Protein sequence | MNPKAFSSLR LKAPMLRNLA SLGYAEMTPI QAHSLPLILA GKDVIARAKT GSGKTAAFGI
GLLSRLDALS FRVQALVLCP TRELADQVGK ELRRLARFTD NIKILTICGG VPFGPQLGSL
EHGAHVVIGT PGRLLDHLRR GSLDLSALRT LVLDEADRML DMGFQDDISA LIAAAPPKRQ
TLLFSATYPD SIAAMSAGVQ REPVEVSVDE VHGEGAIEQV FYEVDSGQRI EAVERILGHY
RPESALIFCN TKLECQEVAN ALAVRGYAAL AIHGDLDQRE RDRVLVRFAN RSASVLVATD
VAARGLDIKE LSAVINYELT RNPEVHTHRI GRTGRAGERG LAVSLVTPRE SRLIAAIADV
PGSIIARGDL STLAPLTAKP PLPPMVTLCI DGGRKNKLRP GDILGALTGE GGMPASEVGK
IDVFDFFTYV AIARQSSEQA LNFLRGHRIK GRFFKVRKAV
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