| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0148 |
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| Symbol | alaS |
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| ID | 2687922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 163809 |
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| End bp | 166436 |
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| Gene Length | 2628 bp |
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| Protein Length | 875 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637124815 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | NP_951210 |
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| Protein GI | 39995259 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.379709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAA AAGAGATACG CGCCCGATTT CTCAAGTTCT TCGCCGACCG GGGGCATGCC
GTCGTGCCCA GCTCCCCCCT CATTCCCCAC AATGACCCAA CGCTCCTGTT CGCCAATGCC
GGCATGAACC AGTTCAAGGA CTGTTTTCTG GGCCTGGAGA AGCGTGATTA CGTCAGGGCC
TGCTCCTCCC AGAAGTGTGT CCGGGCCGGT GGCAAGCACA ACGACCTGGA GAACGTGGGG
CGCACCGCCC GGCACCATAC CTTCTTCGAA ATGCTCGGCA ACTTTTCCTT TGGCGACTAT
TTCAAGAAAG AGGCCATCGC CTTTGCCTGG GAATTCCTCA CCAAAGACCT GGGCCTCGAT
AAAGACCGCC TCTACGTGAC GGTTTATACG GACGACGACG AGGCCGCCGA CATCTGGCAC
CTGCAAGAGG GGGTTCCCCG GGAGCGGATC TACCGCTTCG GCGAGAAGGA CAACTTCTGG
GCCATGGGCG ATACCGGGCC CTGCGGCCCT TGCAGCGAGA TTTTCTGGGA CAACGGTCCC
GAGGTCGGTT GCGGCAGCCC CGACTGCGCC GTTGGGTGCG ACTGCGACCG GTACATGGAG
ATCTGGAACA ACGTCTTCAT GCAGTTCAAC CGCTCCGCCG ACGGGGTGCT CACCCCCCTG
CCCAAGCCCT CCGTCGATAC CGGCATGGGG CTCGAGCGCA TCTCCACGGT CATGCAGGGG
GTGAAGTCCA ACTACGACAC CGACCTGTTC CAGGGGATCA TCGGGCACGT GGAAAAGCTC
TCGGGCAAGC GCTACCGGCA CAGCGAGAAA GACGACGTCT CCATGCGGGT CATGGCGGAC
CACGTCCGGG CCACCACTTT CCTGATCTGC GACGGGGTCC TCCCCTCAAA CGAGGGACGG
GGCTACGTGC TGCGCCGGAT CATGCGCCGG GCCGCCCGGC ACGCGAAGAT GCTCGGCTTT
GCCGAACCAG TCATCTGCCG GATGGTAGAG GCCGTCAACG CCATGATGGG CGACGCCTAC
CCGGAACTTT TGGAGCGTGA GGAGTACATC AGAAAGGTGA TCCGGGCCGA GGAGGAGCGC
TTTGCCGAAA CCCTCGACCG GGGACTCGCC ATCCTCAACG AGGCCGTGGC GGATCTCAAG
AACGAAGGGC GCACGGTCAT CCCCGGCGAG ACCCTGTTCC GGCTCTACGA CACCTTCGGT
TTTCCCACGG ATCTCACCGC GGACATCGTC CGGAGCGAAG GGTTCACCAT CGATGAAGAT
GGTTTCGAAG CCTGCATGGA GCGACAGCGG GAGCAGGCCC GGGAGCACTG GAAGGGCTCC
GGCGAGGAGG GGATCGCCGA GGTCCACAAG ACCCTCCATT CCCGGGGCGT CCGGAGCCGT
TTCACGGGCT ACGAAGCCCG CACCGCCTAC TCTCCGGTGA CGGTCCTCCT CAAGGGCGGG
GCCGAGGTGG CCGAGGCCAC GGCCGGCGAC CGGGTGGAGA TCATCACCGA CGCCACTCCC
TTCTACGGCG AGTCGGGCGG CCAGGTGGGG GACACCGGAA CCATCTCCAC GGGCAGCGCC
CACGTGGAGG TGACGGAAAC GCTTCGTCCT TTCCCGGATC TCATCGTCCA CCGGGGGACC
GTGGTCGAGG GCACCATCAG GCAGGGCGAC GCCTGCGATC TGAAGGTCGC GCCGGGCCGC
GACGCCACCG CCCGCAACCA TACCGCAACC CATCTCCTCC AGTCGGCGCT CCGCCAGGTG
CTGGGGGATC ACGTGAAGCA ATCGGGCTCC CTTGTGGGGC CGGACCGCCT CCGCTTCGAC
TTCACCCATT TCGCGGCCAT GACGCCCGAA GAGATCCGGC GGGTTGAGGA GATCGTCAAC
TCCTGCATCA TGGCCAACGA CGACGTCCAT GCTCGGGAAA TGGCCCTGGA CGAGGCCATG
GAGATCGGCG CCACCGCACT GTTCGGCGAA AAATACGGGG ACACTGTCCG GGTGGTTAGG
GTGGGCGAAG TGAGCATGGA GCTGTGCGGT GGCACCCATG TCCACGCCGC CGGCGACATC
GGTTTCTTCA AGATACTCTC CGAGGCGGGA ATTGCCGCGG GGGTCCGCCG CATCGAGGCC
CTGACCGGCA TGGGCGCCCT GCGTCACGTG CAGCAGCTGG AGGACGAGCG GAAAGAGATC
GCCGCCCTGA TCAAGGCCGA GGGGGGCGAC AATGTGGAGC GTCTCCAGCG GCTGTTGACT
CGTCAGAAGG ATATGCAGCG GGAAATCGAG ACCCTGGAGT CGCGCCTCAA CGCCGCCCGC
TCGGCGGACC TGCTGGCGGA TGTCCGGGAG GTGAACGGCG TCAAGGTCCT CGCCACCCTG
GCTGAGGTGG ACGATCCGAA GAAGCTCCGG GAGCTTGCCG ACACCCTCAA GGACCGGCTC
GGCTCTGGTG TTGTGGCCCT CGGGTGCGTC AAGGAAGGAA AGGCGAATCT TCTGGTGGCG
GTGACCAAGG ATCTGACCGG CCGCGTCAAG GCCGGCGACC TGATCCGTCA GCTTTCCCCC
ATCATCGGCG GTAGCGGAGG AGGGAAGCCG GAGCTGGCCC AGGCGGGCGG AACCCTGCCG
GACAAGCTCG GCGAGGCCCT CGGCAAGGTG TGTGAACTCG TCCCCTGA
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| Protein sequence | MTGKEIRARF LKFFADRGHA VVPSSPLIPH NDPTLLFANA GMNQFKDCFL GLEKRDYVRA
CSSQKCVRAG GKHNDLENVG RTARHHTFFE MLGNFSFGDY FKKEAIAFAW EFLTKDLGLD
KDRLYVTVYT DDDEAADIWH LQEGVPRERI YRFGEKDNFW AMGDTGPCGP CSEIFWDNGP
EVGCGSPDCA VGCDCDRYME IWNNVFMQFN RSADGVLTPL PKPSVDTGMG LERISTVMQG
VKSNYDTDLF QGIIGHVEKL SGKRYRHSEK DDVSMRVMAD HVRATTFLIC DGVLPSNEGR
GYVLRRIMRR AARHAKMLGF AEPVICRMVE AVNAMMGDAY PELLEREEYI RKVIRAEEER
FAETLDRGLA ILNEAVADLK NEGRTVIPGE TLFRLYDTFG FPTDLTADIV RSEGFTIDED
GFEACMERQR EQAREHWKGS GEEGIAEVHK TLHSRGVRSR FTGYEARTAY SPVTVLLKGG
AEVAEATAGD RVEIITDATP FYGESGGQVG DTGTISTGSA HVEVTETLRP FPDLIVHRGT
VVEGTIRQGD ACDLKVAPGR DATARNHTAT HLLQSALRQV LGDHVKQSGS LVGPDRLRFD
FTHFAAMTPE EIRRVEEIVN SCIMANDDVH AREMALDEAM EIGATALFGE KYGDTVRVVR
VGEVSMELCG GTHVHAAGDI GFFKILSEAG IAAGVRRIEA LTGMGALRHV QQLEDERKEI
AALIKAEGGD NVERLQRLLT RQKDMQREIE TLESRLNAAR SADLLADVRE VNGVKVLATL
AEVDDPKKLR ELADTLKDRL GSGVVALGCV KEGKANLLVA VTKDLTGRVK AGDLIRQLSP
IIGGSGGGKP ELAQAGGTLP DKLGEALGKV CELVP
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