Gene GSU0146 details

Gene Information

• Locus tag: GSU0146
• Symbol: pilT-1
• ID: 2687988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 162069
• End bp: 163229
• Gene Length: 1161 bp
• Protein Length: 386 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637124813
• Product: twitching motility protein PilT
• Protein accession: NP_951208
• Protein GI: 39995257
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2805] Tfp pilus assembly protein, pilus retraction ATPase PilT
• TIGRFAM ID: [TIGR01420] pilus retraction protein PilT

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGA ACGATATCCT CACCGTCGCG GTTCGCGCCA AGGCGTCCGA CGTCCACATC 
AAAACGGGCC TCCCGCCCGT CGTGCGGATC GACGGCCGCC TGCGGCCAAT CCCGAACGCG 
CCGCGGCTGG CGCCGGACCA AGTGCGCGCC ATGGCGCTCG CCATCATGAA CGATCGGCAG 
AAGCGTCTCT TCGAGGAGCA CTTCGAATGC GACACTGCCT ACGGCGTGCC GGGCCTGGGC 
CGCTTCCGGG TGAGCGTTTA CTCCCAGCGC GGCACGGTGG CAATGGTGTT TCGCTTCATT 
CCCTTCGGCA TTCCCTCCAT GGAGAACCTG ACCCTGCCGC CGGTCATTAA AAAACTGGCC 
ATGGAGGAGC GGGGCCTCAT TCTCGTCACG GGCACCACGG GGAGCGGCAA GTCCACCACC 
CTGGCCGCCA TGATCGACTA CATCAACGAG CACCGGACCT GCAACATCAT TACCGTTGAA 
GACCCGGTGG AATTCCTCCA TCGCGACAAG AAGAGCATCC TCTCCCAGCG GGAGGTAGGA 
TTCGACACCG TCTCCTTCGC CACCGCCCTC AAGGGTGCCC TCCGCCAGGA CCCGGACGTG 
ATCCTGGTCG GCGAGATGCG CGACCTGGAG ACCATCGAGA CCGCCATGCA CGCGGCCGAA 
ACCGGTCACC TGGTCATGTC GACCCTCCAC ACCCTGGATG CCACCGAGAC CATCAACCGG 
ATCATCTCGG TCTTCCCTCC CTATCACCAG CGCCAGGTCA GGATCCAGCT CGCCGGCGTG 
ATCAAGGGCG TCGTCTCCCA GCGCCTGGTC CCCCGCGCCG ACGGCAAGGG CCGGGTACCG 
GCGGTCGAGA TCATGATCGG CACCGCCCGG ATCAAGGAAT ACATCGACGA CAAGGACAAG 
ACGAAACTCC TCCCCGAAGC CATTGCCCAG GGCTATACCT CGTACGGGAT GCAGACCTTC 
GACCAGTCCC TGATGCTGCT CTACACCCAG AAGCTCATCA CCTACGAGGA GGCGCTCCGC 
CAGTCGTCCA ACCCCGACGA CTTCGCCCTC AAGGTGTCCG GCATTTCGTC CACCTCCGAC 
AGCACGTGGG ACGACTTCGT CCATGACGAG GCTCCCCCTG CGGAGGGAGA GGGCTCCGTC 
GAGGGCATCG AGAAGTTCTA G 

 

Protein sequence

MELNDILTVA VRAKASDVHI KTGLPPVVRI DGRLRPIPNA PRLAPDQVRA MALAIMNDRQ 
KRLFEEHFEC DTAYGVPGLG RFRVSVYSQR GTVAMVFRFI PFGIPSMENL TLPPVIKKLA 
MEERGLILVT GTTGSGKSTT LAAMIDYINE HRTCNIITVE DPVEFLHRDK KSILSQREVG 
FDTVSFATAL KGALRQDPDV ILVGEMRDLE TIETAMHAAE TGHLVMSTLH TLDATETINR 
IISVFPPYHQ RQVRIQLAGV IKGVVSQRLV PRADGKGRVP AVEIMIGTAR IKEYIDDKDK 
TKLLPEAIAQ GYTSYGMQTF DQSLMLLYTQ KLITYEEALR QSSNPDDFAL KVSGISSTSD 
STWDDFVHDE APPAEGEGSV EGIEKF