Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0123 |
Symbol | |
ID | 2687975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | - |
Start bp | 137241 |
End bp | 138326 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637124790 |
Product | nickel-dependent hydrogenase, small subunit |
Protein accession | NP_951185 |
Protein GI | 39995234 |
COG category | [C] Energy production and conversion |
COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.799752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAACAGC ATTGCAAGAG CTCGGGAACA TGGGAAGAAC AGGGGATTTC CCGGCGTGAC TTCCTGAAGT TCTGCACCGC AATGTCGGCG GTGCTGGCCC TGCCGGTTAC CCTGGTGCCT CGAATCGCCG AGGCCCTGGA GGATGACAAG CGCCCCTCGG TCATCTGGCT CGAATTCCAG AGCTGCACCG GCGATACCGA GGCACTCCTG AGAGCCGCCA ATCCCACCGT GGCCGACATC GTCCTGGACG TCCTCTCCGT GGACTACGCC GAGACCATCA TGGCAGCGGC GGGCTTCCAG GCCGAAGCTG CCAGGCACGC AACCATGAAA GCGCGATCCG GCACGTACAT CGCCGTGGTG GAAGGAGCGA TTCCGACCGG AGCAAACGGC GCCTACTGCT GCATCGGCGG CCGGTCGGCC CTGGACATCA CCCGCGAAGT CTGCGGCGGC GCCATGGCAA CTATCACCGT CGGCACCTGC GCCTCCTACG GGGGGATACC GGCGGCGGCG CCCAACCCGA CCGGGGCGGT CGGCGTCAAG GATGCGGTGC CGGGGGCCAC GGTCATCAAC CTCCCCGGCT GCCCCGTCAA CACCGACAAC CTGGTGGCTA CCGTGGTCCA CCTGCTCACC TTCGGCTCCC CGCCGGCCAC CGACGGCAAG GGCCGCCCTC TCTTCGCCTA CGGCAAGCGG ATTCACGATA ACTGCGAGCG ACGGCCCCAC TTTGACGCGG GCCAGTATGT GGAACAATGG GGCGATCAGG CACACCGGGC GGGCCACTGC CTCTACAAAA TGGGCTGCAA GGGCCCCGAA ACCTTCCACA ACTGCCCCTC CCAGCGCTAC AACGAAAAGA CAGCCTGGCC GGTTTCGGCG GGCCATGGCT GCGCCGGCTG CTCCGAGCCC CACTTCTGGG ATTCCATGAC ACCGCTCTAC AAGCGGCTCC CCAATGTGCC CGGCTTCGGC ATAGAGGCTA CCGCCGACCA GATCGGCCTG GGAATCGCAG CGGCCACAGC GGCCGCATTC GGCATCCACG GCGTGGTGAG CGCCCTGCGC AAGGGGAACG ATTCCGACGA TGAGAAGGAG GGGTAG
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Protein sequence | MKQHCKSSGT WEEQGISRRD FLKFCTAMSA VLALPVTLVP RIAEALEDDK RPSVIWLEFQ SCTGDTEALL RAANPTVADI VLDVLSVDYA ETIMAAAGFQ AEAARHATMK ARSGTYIAVV EGAIPTGANG AYCCIGGRSA LDITREVCGG AMATITVGTC ASYGGIPAAA PNPTGAVGVK DAVPGATVIN LPGCPVNTDN LVATVVHLLT FGSPPATDGK GRPLFAYGKR IHDNCERRPH FDAGQYVEQW GDQAHRAGHC LYKMGCKGPE TFHNCPSQRY NEKTAWPVSA GHGCAGCSEP HFWDSMTPLY KRLPNVPGFG IEATADQIGL GIAAATAAAF GIHGVVSALR KGNDSDDEKE G
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