Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0113 |
Symbol | atpD |
ID | 2688131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 127605 |
End bp | 129017 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637124780 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | NP_951175 |
Protein GI | 39995224 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.800377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGA ACTTCGGTAA AATTTCGCAG GTCATCGGCG CGGTTATTGA CGTCGAGTTT GAGCCGGGCA AACTGCCTCC CATCTACAAC GCCCTCCGGG TGACCAACCC GGCCATTGAC GATAAGGAAT ACAACTTGGT GCTCGAAGTG GCCCAGCACC TGGGTGAAAA CGCGGTCCGG ACCATCGCCA TGGATTCCAC CGACGGTCTT GTCCGGGGCC AGGCAGTGCT CGATACCGGT AAGCAGATTT CCGTGCCGGT GGGCCGCAAG ACCCTGGGTC GAATCCTCAA CGTCATCGGC GAGCCGGTGG ACGAGATGGG TCCGGTCAAC GCCGAGAAAG AGTACGGAAT CCACCGCGAA GCTCCCGCCT TCGTGGACCA GTCCACCAAG GTTGAAGCCT TCACCACCGG GATCAAGGTC GTCGACCTTC TCGCTCCCTA CGCTCGGGGC GGCAAGATTG GCCTCTTCGG CGGCGCCGGC GTCGGCAAGA CCGTTCTCAT CATGGAGCTC ATCAACAACA TCGCCAAGCA GCACGGTGGC TTCTCCGTGT TTGCCGGCGT CGGTGAGCGG ACCCGCGAAG GAAACGATCT CTGGATGGAG ATGAAGGAGT CCGGGGTTCT CGACAAGGCC GCCCTCGTCT ACGGCCAGAT GAACGAGCCG CCGGGAGCAC GTGCCCGGGT TGCCCTCTCC GCCCTTTCCA TCGCCGAGTA CTTCCGTGAC GAAGAAGGTC AGAACGTGCT TCTCTTCGTT GACAATATCT TCCGCTTCAC CCAGGCGGGT TCCGAAGTTT CCGCGCTCCT CGGCCGGATT CCCTCCGCCG TTGGTTACCA GCCCACACTG GCCACAGAGA TGGGAGAGCT TCAGGAGCGA ATCACCTCCA CCACCAAGGG CTCCATTACC TCGGTTCAGG CGATCTACGT TCCGGCCGAC GACCTTACCG ACCCGGCTCC GGCAACCGCC TTCGCCCACC TGGACGCAAC GACCGTTCTT TCCCGTCAGA TTGCCGAGCT CGGTATCTAC CCGGCCGTTG ACCCGCTGGA CTCCACGTCG CGGATTCTCG ATCCCCAGGT AATCGGCGAG GAGCACTACT CCATTGCCCG GCAGGTCCAG TACGTGCTCC AGAAGTACAA GGATCTCCAG GACATCATCG CTATTCTCGG TATGGACGAA CTCTCCGAGG AGGACAAGCT GGTCGTTGCC CGGGCCCGGA AGATCCAGCG TTTCCTCTCC CAGCCGTTCC ACGTTGCCGA AGCCTTCACC GGCAGCCCCG GCAAGTACGT TGAGCTGAAG GACACCATCA AGGGCTTCCA GGAGATCGTC GCCGGCAAGC ATGACGATGT CCCCGAGCAG GCCTTCTACA TGGTCGGAAC CATTGAAGAG GCCCTCGAAA AGGCCAAGAA GCTCGCTGCC TAA
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Protein sequence | MSQNFGKISQ VIGAVIDVEF EPGKLPPIYN ALRVTNPAID DKEYNLVLEV AQHLGENAVR TIAMDSTDGL VRGQAVLDTG KQISVPVGRK TLGRILNVIG EPVDEMGPVN AEKEYGIHRE APAFVDQSTK VEAFTTGIKV VDLLAPYARG GKIGLFGGAG VGKTVLIMEL INNIAKQHGG FSVFAGVGER TREGNDLWME MKESGVLDKA ALVYGQMNEP PGARARVALS ALSIAEYFRD EEGQNVLLFV DNIFRFTQAG SEVSALLGRI PSAVGYQPTL ATEMGELQER ITSTTKGSIT SVQAIYVPAD DLTDPAPATA FAHLDATTVL SRQIAELGIY PAVDPLDSTS RILDPQVIGE EHYSIARQVQ YVLQKYKDLQ DIIAILGMDE LSEEDKLVVA RARKIQRFLS QPFHVAEAFT GSPGKYVELK DTIKGFQEIV AGKHDDVPEQ AFYMVGTIEE ALEKAKKLAA
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