| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0103 |
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| Symbol | |
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| ID | 2688164 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 118723 |
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| End bp | 120834 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637124770 |
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| Product | sensory box histidine kinase |
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| Protein accession | NP_951165 |
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| Protein GI | 39995214 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATG CACTGACGCT TCAACCCCTC GAACGAATTG TCACCGAACA CGAAGGATGG
CTTGCGGCTC GCGCGCTCGG CTACGCCAAA AGCTGCGGCT ACACGCGCTA TACGTCCACG
CTTGAAGAAG CCTGGCGGAT TTCCATCGCT GGCCTTTCCG CGTCGCTCAT CCATGCTCTC
CGGGCAAAAG AGCCGATTCC CGAGTTGTCG CCGGATTACG ATTCCGTTGC AGACCCCGTT
ACGCTGTTCG GCATTGAGGA AGCCCGACGT CACCGCATGC GCGGTGTGAC GCTCGGTATG
TTCCTCGGCC TCATGAAATA CTACCGCCGC AGCTACCAGG ATCTGGTGCG CGGCAGTGGG
GTGGATGAGA AAACCCTTGA ATCCGGCCGG CTCTTCATCG ACCGTTTTTT TGACCGTGTT
GAAATTGGGT TCACCACTGA ATGGTCATCG GTTTCCGATC CCCAGCGGCT TGCCGAACTG
GAGGAGGCCA ACCGGTCCAT CACCAACGAG AAGAACAGGC TCCTCACACT GTTTGAAAGC
ATCCCTTCTC CTGTTATGCT TCTGGGTGCC GACGGCCGGC CAGTACTCAT GAACCATGCT
GCAGTCGAGT TATTCGCCGG TCCGACGCCG CCCGGCACGC ATTACTATCG TGAGAGTGGA
AGCCCAGGGC TGGAGGTGGC CGTCCCCCGC TGGAGCCGGC TGAAGCGTTT TCTGAAGGGG
AAGGCGCGGG AGGCGCGTTT CGAGGAGAGC ATCGACACAG CTGCCGGGTG CCGGTATTTT
CTGGTTACCG TGCAGCGGAT GCTCGACGTC AGTGAAAAAT TTTGCGGAAC GACTATCATC
CTTTCCGACC TCACCGGCCG CAAACTCGCC GAAGATGAAC TCCAGCACCT TGTGGCAGAG
ATGGAAGATC GGATCAGGTC TCGAACCGCT GAATTGCTGG ATGCGAACAC GCGTCTGCTG
GAAGAGATTG AGGAGCGCCG CAGGTCTGAG CGCTTTTTCC ACGCCACGAT TGATTCTCTG
ACAGCTCCAG TTGCCATTTT GAACGGCGAG GGGGACATCG TCACCGTCAA CCGGGCTTGG
CGAAAATTCG CCGATGAAAA CGGGGGGCTT CACCCCAATC ACTTCATTGG GTACAATTAT
CTCGGATTGT GCGATAACGT GAAGGGTGAC GATGCCGTCA CCGCTTCCGC TGTGGCGCGG
GGTATTCGAG AGTTGATAGC CGGCCGCATC AATGAGTTCC ATGTGGATTA TCCATGCCAC
TCCCCCGATG AGCAACGGTG GTTCCAGGTC CGTGTCACGA GGCTTGAGAA CGGCAGCCGT
GGCCGGGTCG CCGTGGTCCA TGAAAACATC TCCGAGGTGA AGAAGGCCCA GGAGGAAATT
CTGTCCCTGA ACCGTAGCCT CGAGGAGCGA ATCAGGCACC GGACCCAGCA GCTCGAATGC
TCTAACAGGG AGCTCGAAGG ATTCTGCTAC GCCGTATCCC ATGATCTTCG CTCCCATCTG
GCGAGGCTTG AGGGCCTTGG CCGGGGACTG CTCGAAGACT GTTTCGCAGG TCTCGACAAC
CAGGCCCGTC ACTATGCGGA GCGAATTTGC CGCATCAGTA TGGACCTGCG CAGGGCCATT
GACTCCTTGC TGGACCTCAG TCGGCTCGCT CGGTGCGAAC TTTCTAACGT AACCGTGGAT
TTGAGTGGGG TGGCGGAGCG GGTCGCTGAA GAACTGCACC AGTTGCAGCC GTTAAGACGG
GTGAGTTTTT CCCTTGAGCC CGGCGTAATC GTGCGAGGTG ACCCGCAGCT CCTGGAAACG
GTCATGCGGC ACTTGATGGG TAATGCATGG AAATTCACCA GCCGCCGCGA GGACGCAGAG
ATAGCCTTCG GCTCGACCAT GCTCCACGGT ATGAAGACCT GCTTTGTGCG TGACAACGGC
GTCGGTTTCG ACATGAGGTA TGCCGGCACT CTGTTCCAGC CATTCCAGCG GCTTCATGGC
CCTGCCGAGT TCGACGGCGC CGGGATTGGA CTGGCAACTG TGCAGAGGAT CATTCAGCGT
CACGGCGGGC GCATCTGGGC CGAAGGAGAG AGTGGAAAAG GTGCCGTATT TTTCTTCGTT
TTTCCCGATT AA
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| Protein sequence | MDNALTLQPL ERIVTEHEGW LAARALGYAK SCGYTRYTST LEEAWRISIA GLSASLIHAL
RAKEPIPELS PDYDSVADPV TLFGIEEARR HRMRGVTLGM FLGLMKYYRR SYQDLVRGSG
VDEKTLESGR LFIDRFFDRV EIGFTTEWSS VSDPQRLAEL EEANRSITNE KNRLLTLFES
IPSPVMLLGA DGRPVLMNHA AVELFAGPTP PGTHYYRESG SPGLEVAVPR WSRLKRFLKG
KAREARFEES IDTAAGCRYF LVTVQRMLDV SEKFCGTTII LSDLTGRKLA EDELQHLVAE
MEDRIRSRTA ELLDANTRLL EEIEERRRSE RFFHATIDSL TAPVAILNGE GDIVTVNRAW
RKFADENGGL HPNHFIGYNY LGLCDNVKGD DAVTASAVAR GIRELIAGRI NEFHVDYPCH
SPDEQRWFQV RVTRLENGSR GRVAVVHENI SEVKKAQEEI LSLNRSLEER IRHRTQQLEC
SNRELEGFCY AVSHDLRSHL ARLEGLGRGL LEDCFAGLDN QARHYAERIC RISMDLRRAI
DSLLDLSRLA RCELSNVTVD LSGVAERVAE ELHQLQPLRR VSFSLEPGVI VRGDPQLLET
VMRHLMGNAW KFTSRREDAE IAFGSTMLHG MKTCFVRDNG VGFDMRYAGT LFQPFQRLHG
PAEFDGAGIG LATVQRIIQR HGGRIWAEGE SGKGAVFFFV FPD
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