Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0084 |
Symbol | |
ID | 2688160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 95499 |
End bp | 96674 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637124750 |
Product | hypothetical protein |
Protein accession | NP_951146 |
Protein GI | 39995195 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.928121 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGTTTC CCATTTCCGA TCAGATCCGG TCAGTCCAGT GCGCGCCCAT CGCCGAGGTT AAGAGCTGGC TCGCTCACCG GGAGCCCGAT CCGGAGCGCC CGCTGGTGGA TCTGTGCCAG GCCGTGCCCG ACTATCCGCC GGCCCGTCAG CTGACCGACT ACCTGGCGGC GCTCCTGGAC GATCCGCTGG TGTCGAAATA CTCGCCCGAC GAGGGGCTCC CCGAGGTGCG GGAGGGGGTG TGCGCCCGCT ACGGCCGGGT CTACGGCGCG GCCATGAATC CGGATCAGCT TTGCCTCACC ATCGGCGCCA GCCAGGCGTT CTGGCTCGCC ATGGTTACCC TCTGCCGCGC CGGGGACGAG GTGATCGTCC CGCTCCCCGC CTACTTCGAC CATCCCATGG CCCTGGATAT TCTGGGCGTC AGGCCGGTCT ACCTCCCCTT TGACGAGGAA CGGGGCGGGG TGCCTGACCC GGCCGCGGTG GAGCGTCTCA TCACCCCGCG CACCAGGGCC ATTCTGCTGG TGACCCCTTC CAACCCCACC GGCGTGGTCA CTCCACCGGA AACGATCCAG GAACTCCACG GGGTGGCCCG GCGCCGGGGC ATCGCGCTGG TCCTCGACGA AACCTATGCC GACTTCATCC CCGGCGGCGA GCGGCCCCAC GATCTTTTCC TTGACCCCCG CTGGGGTGAC CACCTGATCC ACCTGATGTC CTTCGGCAAG ACCTATGCCC TCACGGGGTA CCGGGCCGGC TGTCTCGCCG CGTCGAAAGA GTTCATCGGC CACGCCCTTA AGGCCCAGGA CACCATGGCG GTTTGCCAGC CGCGCATCAC CCAGTATGCC GTGCTCTACG GGGTCAGTCA CCTGGACGGC TGGGTGGAAG AGAACCGGCT CATGATGACC CGACGGCACG ACCTCTTCCG GTCGCTCTTT ACCCGTCCCG GCAATCCGTT CAGCCTTGTG GCGAGCGGCA CCTTCTTCGC CTGGGTGCGG CATCCCCTGC AGGAGGGCAC CGGCCGTGAG GCTGCCCGCA GGCTGGCCGT GGAAGCCGGC ATCATCTGTC TCCCCGGCGA AGTATTCGGC CCCGGCCTCG AACCCTACCT CCGCCTCGCC TTCGGCAACA TCCGCGACGA AGCCATCCCC GGGGCGGTGG AGCGATTCCG AGCGTTTGCC CTCTGA
|
Protein sequence | MKFPISDQIR SVQCAPIAEV KSWLAHREPD PERPLVDLCQ AVPDYPPARQ LTDYLAALLD DPLVSKYSPD EGLPEVREGV CARYGRVYGA AMNPDQLCLT IGASQAFWLA MVTLCRAGDE VIVPLPAYFD HPMALDILGV RPVYLPFDEE RGGVPDPAAV ERLITPRTRA ILLVTPSNPT GVVTPPETIQ ELHGVARRRG IALVLDETYA DFIPGGERPH DLFLDPRWGD HLIHLMSFGK TYALTGYRAG CLAASKEFIG HALKAQDTMA VCQPRITQYA VLYGVSHLDG WVEENRLMMT RRHDLFRSLF TRPGNPFSLV ASGTFFAWVR HPLQEGTGRE AARRLAVEAG IICLPGEVFG PGLEPYLRLA FGNIRDEAIP GAVERFRAFA L
|
| |