| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0082 |
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| Symbol | rluD |
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| ID | 2688326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | + |
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| Start bp | 93714 |
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| End bp | 94682 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637124748 |
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| Product | ribosomal large subunit pseudouridine synthase D |
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| Protein accession | NP_951144 |
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| Protein GI | 39995193 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGAGAC AAGATGAGCG ATACGATCTG TCGGTGCCGA CGGAAGGTGA AGCGGAACGG
CTCGACCAGT TCGTGGCCCG CTCGGTCCAG GGAATAACCC GTTCGGCGGC CCAGCGCCTG
ATCGAAGAGG GGCGGGTGAC GGTGGACGAT CGCCTCGAGA AGCCGTCTCT CAAGCTTCGG
GGCGGAGAGC GGGTGGTGGT GACGGTGCCG CCACCGGCCC CCGCAGTGCC TGAAGCGGAA
GAGATTCCGC TGGTTGTCCT CCACGAAGAT GGCGACGTGG TGGTGGTCGA CAAGCCGGCG
GGCATGGTGG TTCACCCGGC CGCGGGAAAT CCCGGCGGGA CCCTGGTCAA CGCCCTTCTG
GCCCACTGTA CGGATCTCTC GGGCATTGGC GGTGAGATTC GTCCCGGCAT CGTCCATCGC
ATCGACAAGG ATACCTCGGG CGTCCTGGTG GTGGCCAAGA GTGACCGGGC CCACGAATCG
CTTTCGCGGC AGTTCCATGA CCACACGGTC AAGAGGGTCT ACCTGGCCCT GGTCTACGGC
TCGCCCCGCG AGGACAAGGG GCGGATCGAG GGGGCCATCG GCCGGCATCC CACGGACCGG
AAGAAGATGT CGGGCGCGGC GCGTCACGGC AAGCACGCGG TCACCCACTG GCGGGTGGCC
GCCCGTTTCA CCGGCGTGAC GCTGCTGCGG CTCCGGCTGG AAACGGGGCG TACCCACCAG
ATCCGGGTGC ACATGGCCGA GGCCGGGTTT CCCCTGGTGG GAGACGAGGT CTATGGGGGC
GCTGGCCGGA TCAACAATCT CAGGGACCCG GTTTTGCGTA AGCTCATCCG GGAACTGGGA
CGTCAGGCAC TGCACGCCAA AACCCTTGGT TTTGTCCACC CGGTCACGGG GGAATACCTG
GAGTTCGACA CTGAGCTGCC CGAGGATATG GCGCGGATTA TCGATTATCT GGAACGACAA
GGAGCCTGA
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| Protein sequence | MERQDERYDL SVPTEGEAER LDQFVARSVQ GITRSAAQRL IEEGRVTVDD RLEKPSLKLR
GGERVVVTVP PPAPAVPEAE EIPLVVLHED GDVVVVDKPA GMVVHPAAGN PGGTLVNALL
AHCTDLSGIG GEIRPGIVHR IDKDTSGVLV VAKSDRAHES LSRQFHDHTV KRVYLALVYG
SPREDKGRIE GAIGRHPTDR KKMSGAARHG KHAVTHWRVA ARFTGVTLLR LRLETGRTHQ
IRVHMAEAGF PLVGDEVYGG AGRINNLRDP VLRKLIRELG RQALHAKTLG FVHPVTGEYL
EFDTELPEDM ARIIDYLERQ GA
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