| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | GSU0025 |
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| Symbol | |
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| ID | 2688562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter sulfurreducens PCA |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002939 |
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| Strand | - |
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| Start bp | 35287 |
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| End bp | 36585 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637124687 |
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| Product | tolB protein |
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| Protein accession | NP_951087 |
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| Protein GI | 39995136 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0382531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACG TAAGAATCTT TGCCACGCTC CTTGCCCTGC TGGTCATCTC CGTCACGCCG
GCGGTGATCC ATTCCGAGGA CGTCTACCGC GAGGTGACCG CCTCGGGGGC CCACAACCTC
ACCCTTGCCG TCGACAATCC ACGGAATCTC GGCGGTGCCG ACGATGCCGC CCTGGCCCGT
GATGTGGCCG AGGTGCTCAG ATTCGACATG ACCTTGGCGG GCCCCTTCAG CGTAATGGCT
CCGCCGGCGG GCACTTCGCC GGGAGGGATT CGTCCCGGCG AATTTGACTT GGACTCCTGG
AGAAATGCCG GCGTCGACCT GCTGGTCAAA AGCGGCTACA CCATCACGGG GGACTCCGTT
ACCATGGAGT TCCGCCTCTA CAACGCCACC CAGGGGCGCG AGCTCGCCGC CAAGCGCTAT
ACCGGCAAAC GCTCGGATCT GCGACGGATC ACCCACACCT TTTCCGATGA CATCATGCAG
ACGATGACTG GGGAGAGGGG TCCTTTCACG GGCAAGATTG CCTTTGTCTC CACCGAGAGC
GGCAACAAGG AAATCTACCT GATGGACTAC GATGGGCATA ACGTACAGCG TCTCACGAAA
AACCGCTCCA TCAACCTGAA CCCCGATTTT TCCCCCAACG GCCGTGAGCT CGCCTATACC
TCCTATCGCC GCGGCAATCC GGATCTTTTT CGACGCGAAA TATTCACCGG AACGGAAGCG
GTGGTATCGT CACACCGGGG CATCAACGTT ACCGGAACCT GGTCCCCGGA CGGCAAACAA
CTGGCCCTTG CCATGAGCAG GGACGGCAAT TCCGAAATCT ACGCTATTTC CCGTGACGGC
AGGGACCCCA GGCGGCTCAC CACCCATCAG GCAATAGATG TTTCACCCGC CTGGTCCCCG
GATGGCAAGC GGATCGCTTT TGTCTCGGAC CGGCTCGGCA AGCCCCAGGT ATTCATCATG
AACGCCGACG GCTCCGACGT ACGGCGACTC ACAACCAGCG GCGCCTATAA TGTCTCGCCC
CGCTGGTCGC CCAAGGGGGA CAGACTCGTC TACTGTCGTC AGGAAGGGGG CTTCCAGATC
TACTCCATTG CGACGGACGG AACCGGTGAC ACCCGCCTTA CCAGCGAAGG GAGCAACGAG
CATCCCCGTT GGTCCCCGGA CGGGCGATTT CTGACGTTCA GTTCCACCCG CGATGGAGGC
GAAGCCATCT ACGTCATGCG TTCCGACGGC AGCGGCCAGA CGCGGGTCTA CCGAAGCAAG
GGAAAAGCGT CCCACCCAAC TTGGTCGCCA CGGTGGTAA
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| Protein sequence | MKHVRIFATL LALLVISVTP AVIHSEDVYR EVTASGAHNL TLAVDNPRNL GGADDAALAR
DVAEVLRFDM TLAGPFSVMA PPAGTSPGGI RPGEFDLDSW RNAGVDLLVK SGYTITGDSV
TMEFRLYNAT QGRELAAKRY TGKRSDLRRI THTFSDDIMQ TMTGERGPFT GKIAFVSTES
GNKEIYLMDY DGHNVQRLTK NRSINLNPDF SPNGRELAYT SYRRGNPDLF RREIFTGTEA
VVSSHRGINV TGTWSPDGKQ LALAMSRDGN SEIYAISRDG RDPRRLTTHQ AIDVSPAWSP
DGKRIAFVSD RLGKPQVFIM NADGSDVRRL TTSGAYNVSP RWSPKGDRLV YCRQEGGFQI
YSIATDGTGD TRLTSEGSNE HPRWSPDGRF LTFSSTRDGG EAIYVMRSDG SGQTRVYRSK
GKASHPTWSP RW
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