Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GSU0004 |
Symbol | gyrA |
ID | 2685711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sulfurreducens PCA |
Kingdom | Bacteria |
Replicon accession | NC_002939 |
Strand | + |
Start bp | 6417 |
End bp | 8990 |
Gene Length | 2574 bp |
Protein Length | 857 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637124666 |
Product | DNA gyrase, A subunit |
Protein accession | NP_951066 |
Protein GI | 39995115 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGAAC AATCCCTGAA CAAGACAGCC GTCAACATCG AAGACGAGAT GAAGCGCTCG TACATGGACT ATGCCATGAG CGTCATCATC GGCCGGGCCC TCCCCGATGT GCGGGACGGG CTCAAGCCGG TGCACCGCCG CTGCCTCTAC GCCATGTACG ACATGGGCAA TGATTACAAC AAGCCCTACA AGAAATCGGC CCGGGTGGTC GGGGACGTGA TCGGTAAGTA TCACCCCCAC GGCGACGCGG CGGCCTACGA TACCATCGTC CGGATGGCCC AGGACTTCTC CCTCCGCTAT CCACTGGTGG ACGGCCAGGG GAACTTCGGC TCCGTGGACG GCGACTCGCC GGCGGCCATG CGGTACACCG AGATCCGGAT GGAGCAGTTG GCCCACGAGC TCCTGAACGA CCTGGAGAAG GAGACCGTGG ACCTGGGGCC CAACTACGAC GGCTCCCTCA CGGAGCCCCT GGTGCTTCCC TCCAAGTTCC CGAACCTCCT GGTGAACGGC TCCTCCGGCA TCGCCGTCGG CATGGCCACC AACATACCTC CCCACAACCT TACGGAGGTC ATCAACGGGA TTATCGCCAC CATCGAGAAT CCGAATATCA GCTTCGAGGA GCTCCTGGCC CTCATCCCCG GCCCCGATTT CCCCACCGGC GGGTTCATCT ACGGCCGGGA GGGAATCCTC CAGGGGTACC GGACCGGCCG CGGCATCGTC CAGATGCGGG CCCGGGCCTC CATCGAGACC CACAAGAAGA CCGAGCGCCA GTCCATCATC GTCACCGAGA TCCCCTATCA GGTGAACAAG GCGAACCTCA TCACCAAGAT CGCCGAACTG GTGCGGGAGA AGAAGCTGGA GGGGATCAGC GACATCCGCG ACGAGTCCGA CCGGGACGGG ATGCGGATCG TCATTGATCT CAAGCGGGAC GAGAATCCCC AGGTGATCCT GAATCACCTC TACAAGCAGA CCCAGATGCA GACCTCCTTC GGCATCAACA TGCTCGCCAT TGTGGCGGGG CGGCCGCGGG TCCTGACGCT TCGGGATGCC ATCGGCCACT TCATCGACCA CCGGCGGGAG ATCGTCACCC GGCGCACCAT CTTTGATCTC AAGAAGGCCG AGGCCAGGGC CCACATCCTG GAAGGGTACA AGATCGCCCT GGACTGGCTC GACGCGGTCA TCGAGCTGAT CCGCGGGTCC AAGACCCCGG CCGAGGCCAA GGAAGGGCTC ATGTCGGGCC TCTTCTCCGA CGAGGAGTGG CTGCGGAAGA TGGGACTCCC GCTGCCGGCC ATCCACAGCC AGTACCAGAA ACCGGTTCGG CTCACCGAGG TCCAGGCCCA GGAGATCCTG AACCTGCGGC TCCACCGCCT GACAGGCCTG GAGCGGGACA AGATCCTCCA GGAGTACGAC GACATCCTCA AATACATCGC CCGGCTCAAG GAAATCCTCG CCTCCGAGGC GGAGATCCTC AAGATCATCG TGGGTGAGCT GCGGGAGCTG AAGGAGAAGT TCGGCGACGA GCGCCGCACC GAGATCGTGG ACCGGAGCGC CGAGATCTCC CTGGAGGACA CCATTGTCGA GGAGGACGTG GTGGTCACCG TCTCCCACAC CGGCTACATC AAGCGGACCG CAGTTTCCCA GTACCGCTCC CAGCGCAGGG GGGGCAAGGG GAAGACCGGC ATGAAGACCA AGGAGGAGGA TTTCGTCGAG CACCTCTTCG TCGCCTCCAG CAAGGACTTC ATGCTCTTTT TCACCGACGC CGGCAAGGTC TACCAGATCA AGGTCTACGA GATCCCCGAG GGGGGCCGGG CCACCCGTGG CAAGGCCATT GTCAACCTTC TGAACCTTCA GGAGAATGAG CAGATCACCG CCATTCTCTC GGTGAAGGGA TTCGACGACG ACCGCAATAT CATCATGGCA ACCCGGCTCG GAGTGGTGAA GAAGAGTCCC CTGCGGGAAT ATGCCAACAT CCGCAGCGGC GGGATCATTG CCGTGAATCT GGACGATGGG GACAAGCTGA TTGCCGTGGC CCTGACCGAT GGCAGGCAGG ACGTGCTCCT GGCATCGAAG AACGGCAAGT CGATCCGCTT CCACGAGGAT GACGCCCGAC CCATGGGCCG GGTCTCCCGC GGTGTGCGGG GAATGTCCCT GGAGGACGAC GACGTGGTCA TCGGCATGGA GATCATCAAT CCCAACGCCA CTGGCTCCAC CATTTTCACC GTCACCGAGA ATGGCTTCGG CAAGCGGACC GAACTGGATG AGTACCGGGT CCAGTCCCGC GGCGGCAAGG GGATCATCAC CATCAAGACC ACCGAGCGCA ACGGCTGCGT GGTGGACATC ATGCAAGTAA CCGATGAAAA CGACCTGATG CTCATCACCG ACCAGGGGAA GATCCTCCGG ATTCCCGTGG CCCAGTTCTC GGTCATCGGC CGCAACACCC AGGGGGTGAG GCTCATGACC GCCGAGCAGA ACGAGCGGAT CGTGGCCGTG GCAAAGCTGG CCGAGAAGGA TGAAGGGGAC GACGGCGCCG ACGGAGGCGA TGATCTCCCC GACGCGGAGG TCGTGGAGGA GTAG
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Protein sequence | MLEQSLNKTA VNIEDEMKRS YMDYAMSVII GRALPDVRDG LKPVHRRCLY AMYDMGNDYN KPYKKSARVV GDVIGKYHPH GDAAAYDTIV RMAQDFSLRY PLVDGQGNFG SVDGDSPAAM RYTEIRMEQL AHELLNDLEK ETVDLGPNYD GSLTEPLVLP SKFPNLLVNG SSGIAVGMAT NIPPHNLTEV INGIIATIEN PNISFEELLA LIPGPDFPTG GFIYGREGIL QGYRTGRGIV QMRARASIET HKKTERQSII VTEIPYQVNK ANLITKIAEL VREKKLEGIS DIRDESDRDG MRIVIDLKRD ENPQVILNHL YKQTQMQTSF GINMLAIVAG RPRVLTLRDA IGHFIDHRRE IVTRRTIFDL KKAEARAHIL EGYKIALDWL DAVIELIRGS KTPAEAKEGL MSGLFSDEEW LRKMGLPLPA IHSQYQKPVR LTEVQAQEIL NLRLHRLTGL ERDKILQEYD DILKYIARLK EILASEAEIL KIIVGELREL KEKFGDERRT EIVDRSAEIS LEDTIVEEDV VVTVSHTGYI KRTAVSQYRS QRRGGKGKTG MKTKEEDFVE HLFVASSKDF MLFFTDAGKV YQIKVYEIPE GGRATRGKAI VNLLNLQENE QITAILSVKG FDDDRNIIMA TRLGVVKKSP LREYANIRSG GIIAVNLDDG DKLIAVALTD GRQDVLLASK NGKSIRFHED DARPMGRVSR GVRGMSLEDD DVVIGMEIIN PNATGSTIFT VTENGFGKRT ELDEYRVQSR GGKGIITIKT TERNGCVVDI MQVTDENDLM LITDQGKILR IPVAQFSVIG RNTQGVRLMT AEQNERIVAV AKLAEKDEGD DGADGGDDLP DAEVVEE
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