Gene GSU0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGSU0004 
SymbolgyrA 
ID2685711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter sulfurreducens PCA 
KingdomBacteria 
Replicon accessionNC_002939 
Strand
Start bp6417 
End bp8990 
Gene Length2574 bp 
Protein Length857 aa 
Translation table11 
GC content63% 
IMG OID637124666 
ProductDNA gyrase, A subunit 
Protein accessionNP_951066 
Protein GI39995115 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGAAC AATCCCTGAA CAAGACAGCC GTCAACATCG AAGACGAGAT GAAGCGCTCG 
TACATGGACT ATGCCATGAG CGTCATCATC GGCCGGGCCC TCCCCGATGT GCGGGACGGG
CTCAAGCCGG TGCACCGCCG CTGCCTCTAC GCCATGTACG ACATGGGCAA TGATTACAAC
AAGCCCTACA AGAAATCGGC CCGGGTGGTC GGGGACGTGA TCGGTAAGTA TCACCCCCAC
GGCGACGCGG CGGCCTACGA TACCATCGTC CGGATGGCCC AGGACTTCTC CCTCCGCTAT
CCACTGGTGG ACGGCCAGGG GAACTTCGGC TCCGTGGACG GCGACTCGCC GGCGGCCATG
CGGTACACCG AGATCCGGAT GGAGCAGTTG GCCCACGAGC TCCTGAACGA CCTGGAGAAG
GAGACCGTGG ACCTGGGGCC CAACTACGAC GGCTCCCTCA CGGAGCCCCT GGTGCTTCCC
TCCAAGTTCC CGAACCTCCT GGTGAACGGC TCCTCCGGCA TCGCCGTCGG CATGGCCACC
AACATACCTC CCCACAACCT TACGGAGGTC ATCAACGGGA TTATCGCCAC CATCGAGAAT
CCGAATATCA GCTTCGAGGA GCTCCTGGCC CTCATCCCCG GCCCCGATTT CCCCACCGGC
GGGTTCATCT ACGGCCGGGA GGGAATCCTC CAGGGGTACC GGACCGGCCG CGGCATCGTC
CAGATGCGGG CCCGGGCCTC CATCGAGACC CACAAGAAGA CCGAGCGCCA GTCCATCATC
GTCACCGAGA TCCCCTATCA GGTGAACAAG GCGAACCTCA TCACCAAGAT CGCCGAACTG
GTGCGGGAGA AGAAGCTGGA GGGGATCAGC GACATCCGCG ACGAGTCCGA CCGGGACGGG
ATGCGGATCG TCATTGATCT CAAGCGGGAC GAGAATCCCC AGGTGATCCT GAATCACCTC
TACAAGCAGA CCCAGATGCA GACCTCCTTC GGCATCAACA TGCTCGCCAT TGTGGCGGGG
CGGCCGCGGG TCCTGACGCT TCGGGATGCC ATCGGCCACT TCATCGACCA CCGGCGGGAG
ATCGTCACCC GGCGCACCAT CTTTGATCTC AAGAAGGCCG AGGCCAGGGC CCACATCCTG
GAAGGGTACA AGATCGCCCT GGACTGGCTC GACGCGGTCA TCGAGCTGAT CCGCGGGTCC
AAGACCCCGG CCGAGGCCAA GGAAGGGCTC ATGTCGGGCC TCTTCTCCGA CGAGGAGTGG
CTGCGGAAGA TGGGACTCCC GCTGCCGGCC ATCCACAGCC AGTACCAGAA ACCGGTTCGG
CTCACCGAGG TCCAGGCCCA GGAGATCCTG AACCTGCGGC TCCACCGCCT GACAGGCCTG
GAGCGGGACA AGATCCTCCA GGAGTACGAC GACATCCTCA AATACATCGC CCGGCTCAAG
GAAATCCTCG CCTCCGAGGC GGAGATCCTC AAGATCATCG TGGGTGAGCT GCGGGAGCTG
AAGGAGAAGT TCGGCGACGA GCGCCGCACC GAGATCGTGG ACCGGAGCGC CGAGATCTCC
CTGGAGGACA CCATTGTCGA GGAGGACGTG GTGGTCACCG TCTCCCACAC CGGCTACATC
AAGCGGACCG CAGTTTCCCA GTACCGCTCC CAGCGCAGGG GGGGCAAGGG GAAGACCGGC
ATGAAGACCA AGGAGGAGGA TTTCGTCGAG CACCTCTTCG TCGCCTCCAG CAAGGACTTC
ATGCTCTTTT TCACCGACGC CGGCAAGGTC TACCAGATCA AGGTCTACGA GATCCCCGAG
GGGGGCCGGG CCACCCGTGG CAAGGCCATT GTCAACCTTC TGAACCTTCA GGAGAATGAG
CAGATCACCG CCATTCTCTC GGTGAAGGGA TTCGACGACG ACCGCAATAT CATCATGGCA
ACCCGGCTCG GAGTGGTGAA GAAGAGTCCC CTGCGGGAAT ATGCCAACAT CCGCAGCGGC
GGGATCATTG CCGTGAATCT GGACGATGGG GACAAGCTGA TTGCCGTGGC CCTGACCGAT
GGCAGGCAGG ACGTGCTCCT GGCATCGAAG AACGGCAAGT CGATCCGCTT CCACGAGGAT
GACGCCCGAC CCATGGGCCG GGTCTCCCGC GGTGTGCGGG GAATGTCCCT GGAGGACGAC
GACGTGGTCA TCGGCATGGA GATCATCAAT CCCAACGCCA CTGGCTCCAC CATTTTCACC
GTCACCGAGA ATGGCTTCGG CAAGCGGACC GAACTGGATG AGTACCGGGT CCAGTCCCGC
GGCGGCAAGG GGATCATCAC CATCAAGACC ACCGAGCGCA ACGGCTGCGT GGTGGACATC
ATGCAAGTAA CCGATGAAAA CGACCTGATG CTCATCACCG ACCAGGGGAA GATCCTCCGG
ATTCCCGTGG CCCAGTTCTC GGTCATCGGC CGCAACACCC AGGGGGTGAG GCTCATGACC
GCCGAGCAGA ACGAGCGGAT CGTGGCCGTG GCAAAGCTGG CCGAGAAGGA TGAAGGGGAC
GACGGCGCCG ACGGAGGCGA TGATCTCCCC GACGCGGAGG TCGTGGAGGA GTAG
 
Protein sequence
MLEQSLNKTA VNIEDEMKRS YMDYAMSVII GRALPDVRDG LKPVHRRCLY AMYDMGNDYN 
KPYKKSARVV GDVIGKYHPH GDAAAYDTIV RMAQDFSLRY PLVDGQGNFG SVDGDSPAAM
RYTEIRMEQL AHELLNDLEK ETVDLGPNYD GSLTEPLVLP SKFPNLLVNG SSGIAVGMAT
NIPPHNLTEV INGIIATIEN PNISFEELLA LIPGPDFPTG GFIYGREGIL QGYRTGRGIV
QMRARASIET HKKTERQSII VTEIPYQVNK ANLITKIAEL VREKKLEGIS DIRDESDRDG
MRIVIDLKRD ENPQVILNHL YKQTQMQTSF GINMLAIVAG RPRVLTLRDA IGHFIDHRRE
IVTRRTIFDL KKAEARAHIL EGYKIALDWL DAVIELIRGS KTPAEAKEGL MSGLFSDEEW
LRKMGLPLPA IHSQYQKPVR LTEVQAQEIL NLRLHRLTGL ERDKILQEYD DILKYIARLK
EILASEAEIL KIIVGELREL KEKFGDERRT EIVDRSAEIS LEDTIVEEDV VVTVSHTGYI
KRTAVSQYRS QRRGGKGKTG MKTKEEDFVE HLFVASSKDF MLFFTDAGKV YQIKVYEIPE
GGRATRGKAI VNLLNLQENE QITAILSVKG FDDDRNIIMA TRLGVVKKSP LREYANIRSG
GIIAVNLDDG DKLIAVALTD GRQDVLLASK NGKSIRFHED DARPMGRVSR GVRGMSLEDD
DVVIGMEIIN PNATGSTIFT VTENGFGKRT ELDEYRVQSR GGKGIITIKT TERNGCVVDI
MQVTDENDLM LITDQGKILR IPVAQFSVIG RNTQGVRLMT AEQNERIVAV AKLAEKDEGD
DGADGGDDLP DAEVVEE