Gene GSU0001 details

Gene Information

• Locus tag: GSU0001
• Symbol: dnaN
• ID: 2686559
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter sulfurreducens PCA
• Kingdom: Bacteria
• Replicon accession: NC_002939
• Strand: +
• Start bp: 1594
• End bp: 2712
• Gene Length: 1119 bp
• Protein Length: 372 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 637124663
• Product: DNA polymerase III, beta subunit
• Protein accession: NP_951063
• Protein GI: 39995112
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog)
• TIGRFAM ID: [TIGR00663] DNA polymerase III, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0872728
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTCA CGATTGACAG GGACACCTTC TCGCGGGCTC TCCAGAAGAT CCAGGGGATC 
GTCGAAAAGC GCAACACCAT GCCGATCCTC TCCAACGTCC TCATCGAGGC ACTGGAAGAT 
CGGATCGAGC TGACCGCCAC CGACCTGGAA GTCGGCATGA AGAGCTCCTA CCCCACAACG 
GTTGCGAGCC AGGGCAAAAT CACCGTATCG GCCAAGAAGC TCTATGAAAT AGTCAAGGAG 
CTTCCCGACG AGACCATATC ATTTCTGACC AAAGCGAACG ACTATGTGGA GATCCGCTGC 
GGCAAGGCCA AGTTCACTAT TGTCGGCCTT TCCTCCGAGG AGTTCCCCTA TTTCCCCAAG 
GTCAATGAAG AGAGCTTCAT CAGGATCGAA AGCGGCCTGC TGGCCGACAT GATCGAGAAA 
ACCTCGTATG CCATCTGCTT CGATGAGACC AAGTACAATC TGAACGGTAC CTTCGTGAAG 
GCGTCCGAGG AAGATGGCCG CTCGATACTT CGCATGGTTG CCACCGACGG CCACCGGCTC 
TCCATCACCC AGAGGGAATT CAACGGTGCA GTAAGCCCCG AGATGGCCAA GGGGGTCATC 
TTCCCCAAGA AAGGCATCTT CGAGCTGAAA AAGATGTGCG AGGAGGAGTC GACCCAGCTT 
TCCCTGGGCT TCCTGGATAA CAGCGCCGTG ATCGTTAAGG GAAACACCGT CGTGGTGATG 
CGCCTGGTGG ACGGAGAGTT TCCCGATTAC ACCAGGGTGG TGCCGGTGGC CAATGACCGG 
ATCGTCACCG TGGCGCGGGA TCCGTTCTTC CATTCGCTGC GCAGGATGTC CATCCTTTCC 
AGCGAAAAGT TCAAGGGCAT CAAGATGGAT ATTCAGGAAA GCGGCATGGT GATCTCTTCC 
AGCAACCCGG AACTGGGCGA GGCGTCCGAA GAACTGGACG CCGTATTTGC CGGAGATGCC 
ATCTCCATCC GCTTCAATGC CAAGTACCTC ATCGATGTGC TGGCAGTGCT GGATGAGAGC 
AGCGTGGCAC TCCACCTGAA GGACGAGCTT TCTCCGGCCA TCGTGAGGCC GGCTGACGGC 
GACGGTTTCA CAGCGGTAAT TATGCCCATG CGTCTGTAG 

 

Protein sequence

MEFTIDRDTF SRALQKIQGI VEKRNTMPIL SNVLIEALED RIELTATDLE VGMKSSYPTT 
VASQGKITVS AKKLYEIVKE LPDETISFLT KANDYVEIRC GKAKFTIVGL SSEEFPYFPK 
VNEESFIRIE SGLLADMIEK TSYAICFDET KYNLNGTFVK ASEEDGRSIL RMVATDGHRL 
SITQREFNGA VSPEMAKGVI FPKKGIFELK KMCEEESTQL SLGFLDNSAV IVKGNTVVVM 
RLVDGEFPDY TRVVPVANDR IVTVARDPFF HSLRRMSILS SEKFKGIKMD IQESGMVISS 
SNPELGEASE ELDAVFAGDA ISIRFNAKYL IDVLAVLDES SVALHLKDEL SPAIVRPADG 
DGFTAVIMPM RL