| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1628 |
|---|
| Symbol | |
|---|
| ID | 3229035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1456045 |
|---|
| End bp | 1456818 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637121185 |
|---|
| Product | metallo-beta-lactamase family protein |
|---|
| Protein accession | YP_182322 |
|---|
| Protein GI | 57233573 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTACA CCGAAGAAAC CAACAGCATC ACTTTTCTAG GTACAGGCGG GGCCAGATTT
ATGGTCAGCC GCCAGATACT GGCTTCGGGC GGAATCTGGC TGAACCTTGA CGGCAAACGG
TTCCTGATTG ACCCCGGCCC AGGCAGTATT GTGCAGGTAT GCCGTCTGGG CTTAAACCCG
GAAAACCTGA GCGCTATCCT TTTGTCCCAC CGCCATCTGG ACCACTCCGG TGATGTAAAC
GTAATGATAG AGGCCATGAC CCAGGGCGGC TTTAACAAAA ACGGCCATTT TCTGGCCCCT
GAAGATGCCC TGGATAACGA ACCGGTTATA TACTCGTATC TAAGGCCGTT TCTGAATGAC
CTGACTGTGC TTGAGGAAGA ACACGAATAC AATCTGGACG GGATAAAGGT TTTCACTACC
CGGCGTCATC AGCACCCGGT GGAAACCTAC GGGTTTATAT TTGAATCTTG CGGAAAGCGC
ATAGGCTACG TAAGTGATAC CCGCTACTTT GAAGATATGC CCCAGATTTA TGCCGGCTGT
GACGTACTGA TAATAAATGT TGTTCTTAGG GAATCTATAG AACGCATTTA TCATTTGAGC
ATAGCGGATG CTGCCAAACT TATCAGCGGG GCTAAACCCA AAACAGCCAT ACTTACCCAC
TTCGGACTGC AGCTTTTCCG GGCAGACCCG GCCAGGATGG CAGCCAAAGT TGAAACCGAA
ACCGGCATAC CTGTCATAGC CGCCGCAGAT GATTTGCTGT TTAAGCTGGA ATAA
|
|---|
| Protein sequence | MSYTEETNSI TFLGTGGARF MVSRQILASG GIWLNLDGKR FLIDPGPGSI VQVCRLGLNP
ENLSAILLSH RHLDHSGDVN VMIEAMTQGG FNKNGHFLAP EDALDNEPVI YSYLRPFLND
LTVLEEEHEY NLDGIKVFTT RRHQHPVETY GFIFESCGKR IGYVSDTRYF EDMPQIYAGC
DVLIINVVLR ESIERIYHLS IADAAKLISG AKPKTAILTH FGLQLFRADP ARMAAKVETE
TGIPVIAAAD DLLFKLE
|
|---|
| |