Gene DET1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1612 
Symbol 
ID3229065 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp1444691 
End bp1445353 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content50% 
IMG OID637121169 
ProductHhH-GPD family DNA repair protein 
Protein accessionYP_182307 
Protein GI57233603 
COG category[L] Replication, recombination and repair 
COG ID[COG2231] Uncharacterized protein related to Endonuclease III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTCAGC AAAATTTAAG CCAAAAACTC AGTGACATAT ACCAGTGTCT TTTAGATAAA 
TACGGCCCTC AGCACTGGTG GCCGGCTGAA AGCCGCTTTG AGATGATGAC AGGTGCGGTG 
CTTACCCAGA GTGCCGCCTG GACAAATGTA GAAAAAGCCA TTGCAAGATT AAAAGAGGCT 
GGTCTGCTCT CACCGGAAGC TATAATGAAG ACCGATGAGG ATACTCTGGC CGAAGCTATC 
CGTCCCTCAG GCTACTTCAA TGTCAAAACC CGTAAACTAA AGGCTTTAGC TGCCTGGCTT 
GTAGCTGGTT ATAACGGACA GGCTGATAAA CTGCTGCCGG CGGAGACTGA CGCACTCCGC 
CAGGAACTTC TGGGGGTATG GGGCATAGGT GAGGAAACGG CAGATTCCAT ACTTTTATAT 
GCCTGCGGAA AACCCGTTTT TGTTATAGAT GCTTATACCC GCAGAATTTT CAGCCGTTTG 
GGTCTGGCGG AGAGGGATGC GGGTTATGAC CGTCTTCAAA GGCTTTTTAC GGCAAATCTG 
GCGGCTGATG CCGCGGTTTT TAACGAATAC CATGCCCTAG TAGTCAGGCA TGCCAAAGAG 
CATTGCAGGG TCAAGCCTGT GTGTCAGGGG TGCGTGCTGA AAACTATCTG CGGCTTTAAC 
TGA
 
Protein sequence
MAQQNLSQKL SDIYQCLLDK YGPQHWWPAE SRFEMMTGAV LTQSAAWTNV EKAIARLKEA 
GLLSPEAIMK TDEDTLAEAI RPSGYFNVKT RKLKALAAWL VAGYNGQADK LLPAETDALR 
QELLGVWGIG EETADSILLY ACGKPVFVID AYTRRIFSRL GLAERDAGYD RLQRLFTANL 
AADAAVFNEY HALVVRHAKE HCRVKPVCQG CVLKTICGFN