Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1580 |
Symbol | |
ID | 3229129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1421678 |
End bp | 1422265 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637121138 |
Product | TetR family transcriptional regulator |
Protein accession | YP_182277 |
Protein GI | 57233666 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000739015 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGAT TTGAAAAACG CAAGACCCAG AGTAAAGAAG CTATTTTGAA AGTTGCCCTG GAATTATTTG AACAGCATGG TTTCAGCCGT GTTTGCATAC CTGAAATTGC CCGGCAGGCA GGCGTTTCAC CGGTGACGGT CTATAATCAC TTCGGAAATA AAGAAGAGCT TATCAAAGAG ATATTCAAGG TCTTTCTGGA TAACCTGCTG GATAGCTACC GCAAGATAAT AGAGGCCAAA ATGCCGTTTG AGGAAAAGCT GGAGACCTTG TTTTTCAGCC AGGAGGCCTT TACCCAGCAG TATCAGGGTG AGCTTATGGA GACCTCCGCG AAGCGTTATC CGGTAGTGCA GGAGTATATT GATGATTACT GGGGAGAGCA GCGGGACAAC CTTATCGGCA AGCTTCTGGC TGAAGGGAAA GCCGGCGGTT ACATACGGCC AGACCTCAGC CTGCAGGTCT TTTTCTTTTA CTATCAGATA GTCAGGCGGG GTGTTTATGC CATACCTAAT ATTGCTGAAA GAATGCTGAA TAAACCCCAT CTTATGCCGG AGGTCATCTC GGTGGCTATC CATGGTTTGC GCGGTTAG
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Protein sequence | MDGFEKRKTQ SKEAILKVAL ELFEQHGFSR VCIPEIARQA GVSPVTVYNH FGNKEELIKE IFKVFLDNLL DSYRKIIEAK MPFEEKLETL FFSQEAFTQQ YQGELMETSA KRYPVVQEYI DDYWGEQRDN LIGKLLAEGK AGGYIRPDLS LQVFFFYYQI VRRGVYAIPN IAERMLNKPH LMPEVISVAI HGLRG
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