Gene DET1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1579 
Symbol 
ID3229130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1420250 
End bp1421617 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content50% 
IMG OID637121137 
Productmechanosensitive ion channel family protein 
Protein accessionYP_182276 
Protein GI57233667 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.397271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGATAG AATTTACACT TGAAAGTCTG GTTATGCTGG CTATTGTAGC AGCTGTGGCC 
TTGGTGCTGT TTTTGTTGGT AAACAGGCTG TTTTCCAAAT TTATACGCAA AGATGAGGAA
AACAAAGTAA GCCTGCTCAG GAATGTTCTT AAAGCCATCC GCCTCCCGGT TTTGCTCATT
ATCTGGTGTC TGGCGCTGTA TGTTATTACT GAAAATCTGA CTATTGAAGT AGAGCTAGGC
AAGCAGATTT CCCAGGCTCT TGAGCTACTC ATGGTAGCCT TTACTCTTTG GATAGGGGCC
GGGCTTATAG AGGGGCTGCT TAGCTGGCTG AAAACGGAAA TACCCGGCAA GGCCAATTCA
AAGGTAAATG ACTATATAAT AGACAGCCTC CGTTTCGTAG TGCCCTTTCT GGCACTGCTG
GCGCTGGTTG TGGCAGGTAT AAATGTATAC GGGGTGTCAG CCGACGGGCT GACTGTCTGG
CTGGGTACGC ACGGAGTCAA ACTGCTGCTT ATTATCGGTT TGGTGATTGC CGGGGTTTAT
GCCGTCAGCC GGGGGGTGCC GGCCCTTATC CGCGGCATAA TGTTCGGCGG GGTTGCCAAA
CCCAAAGAAG AGGCCAGAAA GCGGGCGGAT ACCCTTATCG GGGTGGCCGT TTCCACTGCT
GAGGTAGTAG TGGTGGCTAT GGGGGCTTTT GTAGCGCTGT CTGAAGTGGG GCTGGATATC
GGGCCTATCC TGGCCGGGGT CGGCGTTCTG GGGGTGGCTA TCGGCTTTGG CGCCCAGAGT
CTGGTCAAAG ACTATCTTTC AGGTTTGTTT ATCATACTGG AAAACCAGTA TTCGGTGGGA
GATGTAATAA AGGTTATGGA TGTGGTGGGA GAGGTGGAAT TTATAGACCT CCGCCGGACC
ATTGTGCGTG ACCTGGACGG GGTGGTGCAC GTGGTTTCCA ACGGCGAAAT ACGGATAACC
AGTAACTACA CCAAGTACCT TTCAAGGGTT AATTTTGATA TCAGCATCGG CTATCAGGAA
GATATAAATC ACGCCATAGA TGTTATAAAC AGAGTATGCG CCGAATTTAC CAGTGAACCC
GAATGGAATA AATCTGTAGT TAAAAATTCA CTTGGGGTGC TCAGGGTAAA TAAACTGGGT
GATTCCGGGG TGGATATAAA AGTGCTGGGT GACGTCAAGC CTGGTACCCA GTGGGCTATA
AAAGGCGAGC TTCGCAAGCG GATAAAGATA GCTTTTGACC GCGAAAATAT TGAAATACCC
TGGCCGCATA CCAAAGTATT CTTCGGCAAT GCTCTGCCGG ATACAAAGGC GCAAATTCCC
AAAGTGCCGG ATGGAGAACA TCCGGAAGCG GAGTCTGACT CGGAGTAG
 
Protein sequence
MLIEFTLESL VMLAIVAAVA LVLFLLVNRL FSKFIRKDEE NKVSLLRNVL KAIRLPVLLI 
IWCLALYVIT ENLTIEVELG KQISQALELL MVAFTLWIGA GLIEGLLSWL KTEIPGKANS
KVNDYIIDSL RFVVPFLALL ALVVAGINVY GVSADGLTVW LGTHGVKLLL IIGLVIAGVY
AVSRGVPALI RGIMFGGVAK PKEEARKRAD TLIGVAVSTA EVVVVAMGAF VALSEVGLDI
GPILAGVGVL GVAIGFGAQS LVKDYLSGLF IILENQYSVG DVIKVMDVVG EVEFIDLRRT
IVRDLDGVVH VVSNGEIRIT SNYTKYLSRV NFDISIGYQE DINHAIDVIN RVCAEFTSEP
EWNKSVVKNS LGVLRVNKLG DSGVDIKVLG DVKPGTQWAI KGELRKRIKI AFDRENIEIP
WPHTKVFFGN ALPDTKAQIP KVPDGEHPEA ESDSE