Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1579 |
Symbol | |
ID | 3229130 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1420250 |
End bp | 1421617 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637121137 |
Product | mechanosensitive ion channel family protein |
Protein accession | YP_182276 |
Protein GI | 57233667 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.397271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGATAG AATTTACACT TGAAAGTCTG GTTATGCTGG CTATTGTAGC AGCTGTGGCC TTGGTGCTGT TTTTGTTGGT AAACAGGCTG TTTTCCAAAT TTATACGCAA AGATGAGGAA AACAAAGTAA GCCTGCTCAG GAATGTTCTT AAAGCCATCC GCCTCCCGGT TTTGCTCATT ATCTGGTGTC TGGCGCTGTA TGTTATTACT GAAAATCTGA CTATTGAAGT AGAGCTAGGC AAGCAGATTT CCCAGGCTCT TGAGCTACTC ATGGTAGCCT TTACTCTTTG GATAGGGGCC GGGCTTATAG AGGGGCTGCT TAGCTGGCTG AAAACGGAAA TACCCGGCAA GGCCAATTCA AAGGTAAATG ACTATATAAT AGACAGCCTC CGTTTCGTAG TGCCCTTTCT GGCACTGCTG GCGCTGGTTG TGGCAGGTAT AAATGTATAC GGGGTGTCAG CCGACGGGCT GACTGTCTGG CTGGGTACGC ACGGAGTCAA ACTGCTGCTT ATTATCGGTT TGGTGATTGC CGGGGTTTAT GCCGTCAGCC GGGGGGTGCC GGCCCTTATC CGCGGCATAA TGTTCGGCGG GGTTGCCAAA CCCAAAGAAG AGGCCAGAAA GCGGGCGGAT ACCCTTATCG GGGTGGCCGT TTCCACTGCT GAGGTAGTAG TGGTGGCTAT GGGGGCTTTT GTAGCGCTGT CTGAAGTGGG GCTGGATATC GGGCCTATCC TGGCCGGGGT CGGCGTTCTG GGGGTGGCTA TCGGCTTTGG CGCCCAGAGT CTGGTCAAAG ACTATCTTTC AGGTTTGTTT ATCATACTGG AAAACCAGTA TTCGGTGGGA GATGTAATAA AGGTTATGGA TGTGGTGGGA GAGGTGGAAT TTATAGACCT CCGCCGGACC ATTGTGCGTG ACCTGGACGG GGTGGTGCAC GTGGTTTCCA ACGGCGAAAT ACGGATAACC AGTAACTACA CCAAGTACCT TTCAAGGGTT AATTTTGATA TCAGCATCGG CTATCAGGAA GATATAAATC ACGCCATAGA TGTTATAAAC AGAGTATGCG CCGAATTTAC CAGTGAACCC GAATGGAATA AATCTGTAGT TAAAAATTCA CTTGGGGTGC TCAGGGTAAA TAAACTGGGT GATTCCGGGG TGGATATAAA AGTGCTGGGT GACGTCAAGC CTGGTACCCA GTGGGCTATA AAAGGCGAGC TTCGCAAGCG GATAAAGATA GCTTTTGACC GCGAAAATAT TGAAATACCC TGGCCGCATA CCAAAGTATT CTTCGGCAAT GCTCTGCCGG ATACAAAGGC GCAAATTCCC AAAGTGCCGG ATGGAGAACA TCCGGAAGCG GAGTCTGACT CGGAGTAG
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Protein sequence | MLIEFTLESL VMLAIVAAVA LVLFLLVNRL FSKFIRKDEE NKVSLLRNVL KAIRLPVLLI IWCLALYVIT ENLTIEVELG KQISQALELL MVAFTLWIGA GLIEGLLSWL KTEIPGKANS KVNDYIIDSL RFVVPFLALL ALVVAGINVY GVSADGLTVW LGTHGVKLLL IIGLVIAGVY AVSRGVPALI RGIMFGGVAK PKEEARKRAD TLIGVAVSTA EVVVVAMGAF VALSEVGLDI GPILAGVGVL GVAIGFGAQS LVKDYLSGLF IILENQYSVG DVIKVMDVVG EVEFIDLRRT IVRDLDGVVH VVSNGEIRIT SNYTKYLSRV NFDISIGYQE DINHAIDVIN RVCAEFTSEP EWNKSVVKNS LGVLRVNKLG DSGVDIKVLG DVKPGTQWAI KGELRKRIKI AFDRENIEIP WPHTKVFFGN ALPDTKAQIP KVPDGEHPEA ESDSE
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