| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1560 |
|---|
| Symbol | |
|---|
| ID | 3229164 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | + |
|---|
| Start bp | 1406081 |
|---|
| End bp | 1407115 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637121118 |
|---|
| Product | sensory box sensor histidine kinase |
|---|
| Protein accession | YP_182257 |
|---|
| Protein GI | 57233701 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4585] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0374606 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGGCG AAAAACAATT ACCAACGCAA GAAGTTTTGC CCGCAAATGA TTTGATGATA
AGCGGTATCA GAGATTCGGT ATTTATTGCG GATCTAAATG GCAAAATAGT ATTTGCTAAT
GATCAGGCTT GTAAAGTTCA CGGATATACA AAAGGCGAAT TTAAAGGCCT GAATGTCATA
GATATAGTCC CACCCGAGCG GGTTAAAGAG GTTATGCCAC ACATCAACAA AGTCAAAGCA
CAGGGATATT CTATTCATAA TTCAATTCAC CGATGTAAAA ATGGTGAAAT AAAAATATCA
GAGATTTCCT TAAGGCTTAT TGAGATGGAC AACCATGAAT ATATCCTGGC ATTGTTTAAG
GATATATCTG AGTTCCAAAC AAAAATTCAG ACTTATGTTG CAGCACAAGA AAAAGAACGG
GAGTGGGTTT CAATTGAGAT TCACGACAGG ATTGTCCAGA ATCTGTCTGG GATTTTGCAT
CAAATAAATG CTTTGACCCT CTGCAAGAAA CCTTTTAATA AGGATAAAAG AGATAAACTG
GATGAATTAT CGGGGCAATT GAATAATACT ATAATTGAAG CTCGAAGTAT TATGCGGGAA
CTTTACCCAA GCACACTCGC TAGGTATGGA CTTATCAGGC TAATCCAAGA AGAATCAATT
CATCTGCAAG ATGAAATGCA TTGTGAGATA AAGTTTAATC ATTCACTGAC AAAAGCAGTG
CCGCCGTATT TAGAGACAAC AATATACCGG ATTGTCCATG AGGCTTTATT AAATGCTAAG
AAGTATTCTC AGGCATCACA AATAGTTGTT GATCTTAATA GGACTGATAA AAATATTTCG
CTTGACATAT GTGATAACGG AATCGGTTTT TGCTTAAAAA ACGTCGATTG GATACGGCCG
AGTGGGTTAC AAAGTATGCG CCAAAGAGCA GAGATTGTCA GCGGAACATT TTGTATTAGA
AGTGGGGTAA AGGGTACCTG TATTCATGTT TTGCTGCCTA TAATTAATCA CATAATGCCT
ACATTATCAC TTTAA
|
|---|
| Protein sequence | MLGEKQLPTQ EVLPANDLMI SGIRDSVFIA DLNGKIVFAN DQACKVHGYT KGEFKGLNVI
DIVPPERVKE VMPHINKVKA QGYSIHNSIH RCKNGEIKIS EISLRLIEMD NHEYILALFK
DISEFQTKIQ TYVAAQEKER EWVSIEIHDR IVQNLSGILH QINALTLCKK PFNKDKRDKL
DELSGQLNNT IIEARSIMRE LYPSTLARYG LIRLIQEESI HLQDEMHCEI KFNHSLTKAV
PPYLETTIYR IVHEALLNAK KYSQASQIVV DLNRTDKNIS LDICDNGIGF CLKNVDWIRP
SGLQSMRQRA EIVSGTFCIR SGVKGTCIHV LLPIINHIMP TLSL
|
|---|
| |