| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1552 |
|---|
| Symbol | |
|---|
| ID | 3230571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1398114 |
|---|
| End bp | 1399778 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637121109 |
|---|
| Product | resolvase domain-containing protein |
|---|
| Protein accession | YP_182249 |
|---|
| Protein GI | 57235099 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.914203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGATGTT TGCCGTCGCT TAAAAGGCCA AAGGAGCGGG AAATGAAAGT CGCACTTTAC
GCCAGGGTAT CCAGCGAAGC TCAGGACGTA GAATTATCCA TTGCCGCCCA GTTAAGGGCA
CTTAGGGATT ATGCCGGAAA AAATAACTAT CAGATTACTT ATGAATTTAT AGATGAGGCT
GAAAGCGGGC GGACTGCCGC CAGACCTGAA TTTAAACGGA TGATAGCCAT GTCCAAGTCA
TCCATACCAC CTTTCGAAGC TATATTAGTC TGGAAACTTA ATCGCTTTGC CCGTAACCGG
GCTGACTCTA TTACCTATAA ACTACTGCTT CAGAAAAAGG GCATTAAAGT CATCTCCATA
AACGAACCCC TTGACGATTC ACCCACCGGC AAGCTGATGG AAGGAATAAT AGAGTCTCTG
GACGAATTTT ATTCAGCCAA CTTAGGGCAG GATATAAAGC GGGGAATGAA AGAAAATGCC
CTCAGGGGAT TTTATAACGG AAGCCAGCCG CCTTTAGGAT ATGAACTTGT AAAAGTGAAG
GATGGCCCAA AGCAACGGAA TAAACTTGCC CCCGAAGCGG ATACCTCTCC GGGAGTTAAA
ACCGTAAGAT ACATATTTGC TCTGGCGGAT AAAGGCAAGG GCTGTAAAGA AATAGCCAAT
ATTCTCAACC GGGAAGAATA TATAACTAAG GCAGGTAAAC CCTGGGGCAG GACGACGGTT
CATAAGATAC TCTGCAATGA AGCCTATACA GGCACTCTGG TATGGGGAGC CAGACCCAGC
CAAGGTCTGG CTAAAAATGA AGAGGCAGTG CGGTTAGAAA ATGCCTGGCC GGGTATTATA
GACAAGGAAA CTTTCCAGCG TATCCAGCAG AGCATGGTCT CCCGCCAGCC TAAAAATACC
CACCCCCGGA CAGTACCCAG CCAGTACCTG TTAAGCGGAA TGGCTTTTTG CTCCTGTGGT
GCGGCTCTGA CCGGGCACAG TGCCAAATCA GGCCAGTATG CGTACTATCA GTGTAACCGG
AAGTTTAAAC AGGGAAACGG GGTCTGTAAC TGCCAGGCAA TACCTAAAAC AAAATTGGAA
TCAGCTGTTA TTAAGCAAAT AAAGTCCAAG GTATTAACCG AAGAAAATCT GGAGGAACTA
GTAAAACAGG TCAATGAGGA ACTTGAATCA ACTTCCAGCC ATCATAAGGA AAAGCTGGCC
GTTTTGGATG CCGAACTGGA TGATATCAGA CAGAGGTTAA ACCGCCTGTA TGAGGCTATT
GAAAGCGGCA AGTTAAATTA TGACGATCTG GCGCCCCGGA TAAGAGAGCT TAGGGAACGG
CAGTCTAAAC TTGAAAAGTC CAGGGTATTA GCTGAAGCTG AGATGGTAGC TGATAGTGAC
GACAATTTTA ATCTTGGGAT GGTTAAAGCC TATGCAAATG ACCTTAAACA GCTGCTTAAC
GAATCGGAGA TAACCGACTG CAAGACTTTC TTAAAGACTT TTGTTAAGAA GATTGAAACA
GATAGCCGTA ATGTGAGCTT GAAATATACC CTGCCGCTAC CGGGAACTAA CAGAAGAAGG
GAAGTTCTAC CTATTGATAC CTTTGGTGGA GCTGAGGGGA TTCGAACCCC TGACCTCTGC
GATGCGAACG CAGCGCTCTC CCAACTAAGC TACAGCCCCA TGTAA
|
|---|
| Protein sequence | MRCLPSLKRP KEREMKVALY ARVSSEAQDV ELSIAAQLRA LRDYAGKNNY QITYEFIDEA
ESGRTAARPE FKRMIAMSKS SIPPFEAILV WKLNRFARNR ADSITYKLLL QKKGIKVISI
NEPLDDSPTG KLMEGIIESL DEFYSANLGQ DIKRGMKENA LRGFYNGSQP PLGYELVKVK
DGPKQRNKLA PEADTSPGVK TVRYIFALAD KGKGCKEIAN ILNREEYITK AGKPWGRTTV
HKILCNEAYT GTLVWGARPS QGLAKNEEAV RLENAWPGII DKETFQRIQQ SMVSRQPKNT
HPRTVPSQYL LSGMAFCSCG AALTGHSAKS GQYAYYQCNR KFKQGNGVCN CQAIPKTKLE
SAVIKQIKSK VLTEENLEEL VKQVNEELES TSSHHKEKLA VLDAELDDIR QRLNRLYEAI
ESGKLNYDDL APRIRELRER QSKLEKSRVL AEAEMVADSD DNFNLGMVKA YANDLKQLLN
ESEITDCKTF LKTFVKKIET DSRNVSLKYT LPLPGTNRRR EVLPIDTFGG AEGIRTPDLC
DANAALSQLS YSPM
|
|---|
| |