| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1545 |
|---|
| Symbol | |
|---|
| ID | 3229172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1392249 |
|---|
| End bp | 1393751 |
|---|
| Gene Length | 1503 bp |
|---|
| Protein Length | 500 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637121103 |
|---|
| Product | reductive dehalogenase, putative |
|---|
| Protein accession | YP_182243 |
|---|
| Protein GI | 57233709 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1600] Uncharacterized Fe-S protein |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGT TTCATTCCAT GGTATCCCGC CGTGATTTTA TGAAGGGTTT GGGTATGGCC
GGGGCAGGCA TAGGCGCTGT TGCGGCGTCA GCTCCGGTTT TTCATGACAT TGATGAACTT
ATAGCCTCTG ATACAGCTGT TCAGCCGCGT CCCTGGTGGG TAAAAGAACG CCCTATTGAT
GACCCTACCA TAGAGGTAGA CTTTGATATG ATGGAACGCC ATGACGGGCG CAATCAGGGT
CAGTCCGCCA GAGTCAGGGC TATGTATTAC GGGGCAGATA GAGTTCTGGG GGCTGCGGCC
TTGTCCGCTG CCGAACTGGC TGAAAGAACT GCCTCAAATT ATCCGGGATA TACTTACCGG
TCAAGGGCGT TAGCCGGCAG CTTTAAACGG GTTTCTCCGG GTACTGCCCC GGGCTGGGCT
GAAACCAAAG ACCCCGCTCC GGTAAAAACT CCCGAAGAAC GGGGCGAACC GAAGTGGACT
GGTACTCCCG AAGAAGCTTC CCGTATGCTT AGAGCGGCTA TGCGGGCTTA TGGTGCTTCG
CTGGTAGGCT ATACCGAGCT TACCCAGGAA CATCGTGACC ATGTTATCTT CTCGTATGAG
AAGGGTGATT CAAATAACGA AAAATACATC GGTACCGACG TACCGGTTAC CGCTGCCCGC
CCCATTGTCT TTGAAAATGT AGCGAAAGCA TATGAGACCA CTGAAAAGCT GGTCATTCCC
AATGTACCCC TTTGGGAGAT AGCCCTTTCA ACCCAGGGTT CAAATGAGCT TTGGCGTTCC
TCCGGCACTT TGCTGGGCGG TTTTGCCAAT TCCAATACCT TTTACAACTG TGGCAATCTG
CACGCCTCCA CCTACAACTT CCTCAGGTAT TTGGGTTATC AGCTTATCGG CACTATCGGT
AATGATGCCC GCTACGTAGG TTCCGAAGGC GGAGCGGCTA TTATGGCCGG TCTGGGTGAA
GCCAGCCGCC AGAAACTTTA TACCCTTACT CCCGAATATG GCGCTCCCGG CCGTTTATAT
GGCGTCTTAA CAGACCTGCC TCTTGAACCT ACCCACCCCA TAGACGCCGG TATTTACCGC
TTCTGCCATT CCTGCCAGAA GTGTGCTGAC CATTGCCCGC CTCAGGTTAT ATCCAAAGAG
AAAGAACCCT CCTGGGATAT ACCCCTGACC GAAGGCAAGG AGACCATTTT CTCGGTTAAA
GGTACCAAGG CTTTTTATAA CAATCTGCCC CTGTGCCGCC AGTATTCCAA CGAAACCTCT
CATGGCTGCC GCATTTGCTG GGGTGAATGC ACCTTTACCG TTAACCGGGG CTCACTGGTG
CATCAGATTA TCAAAGGCAC TGTGGCTAAT GTTTCTCTCT TCAACACCTA CTTCTACAAG
CTGGGTGAGG CCTTTGGTTA TGGTGCTGAT GCCGAAAAAG CCGAAACATG GTGGGATCTC
AGCCTGCCTA CTCTTGGTCA GGACTCAACC ATTACCGCGG CTGATGGCGG TTACGGTAAA
TAG
|
|---|
| Protein sequence | MSKFHSMVSR RDFMKGLGMA GAGIGAVAAS APVFHDIDEL IASDTAVQPR PWWVKERPID
DPTIEVDFDM MERHDGRNQG QSARVRAMYY GADRVLGAAA LSAAELAERT ASNYPGYTYR
SRALAGSFKR VSPGTAPGWA ETKDPAPVKT PEERGEPKWT GTPEEASRML RAAMRAYGAS
LVGYTELTQE HRDHVIFSYE KGDSNNEKYI GTDVPVTAAR PIVFENVAKA YETTEKLVIP
NVPLWEIALS TQGSNELWRS SGTLLGGFAN SNTFYNCGNL HASTYNFLRY LGYQLIGTIG
NDARYVGSEG GAAIMAGLGE ASRQKLYTLT PEYGAPGRLY GVLTDLPLEP THPIDAGIYR
FCHSCQKCAD HCPPQVISKE KEPSWDIPLT EGKETIFSVK GTKAFYNNLP LCRQYSNETS
HGCRICWGEC TFTVNRGSLV HQIIKGTVAN VSLFNTYFYK LGEAFGYGAD AEKAETWWDL
SLPTLGQDST ITAADGGYGK
|
|---|
| |