| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1538 |
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| Symbol | |
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| ID | 3229187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | - |
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| Start bp | 1386684 |
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| End bp | 1388162 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637121096 |
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| Product | reductive dehalogenase, putative |
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| Protein accession | YP_182236 |
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| Protein GI | 57233724 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1600] Uncharacterized Fe-S protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.308887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGT TTCACACTAG TCTTAGCCGC AGAGATTTTA TGAAGGGGTT AGGCTTAGCC
AGTGCCAGTA TTGGCGCAGT GGCCGCCGTC TCTCCGATTT TCCATGACCT TGATGAAGTA
GCCTCTGCTG ATTCATCTGT TAACAAACGC CCCTGGTGGG TAAGAGAGGT TGACAAGCCT
ACTATTGAAA TAGACTGGGA TAAAATGGCT GCTTTGGCTA TACCAACCGA AGGCTGCCAT
CTTCCGCCCC TGCTGGCCGA ATTTGTAGGA TGGGACAGGG TAAATACAGC TATGGCTCAG
GGGCAGACAG CCCTTAAGGA AGGGGCACAA AAGGTTGGTT CACGTGAAGC TATTTCGCTG
CTGGATACCG CCATTCAGGA GGCCAGCTGG CCTCATTTTC TGACCCAGGC AGGCTGGCGG
GAGCCGGTTA CTCCGGTACT GGCAGACCCG GCGCCTATTC CCGAACTGGT CGGCTCTATC
ATGACCCACG AAACTTTGGG GGTGGCTAAA TGGGAGGGAA CTCCTGAAGA GAATTTTGCC
CTGCTCAAAT CTGCTATGAG GTTTTTCGGG GCTGGACAGA TTGCTTCTAT AGAGCTGGAT
ACCAATGTTA AAAAAATGCT CTACCCGCAG GATGCCAGCC GGATGTTTTT CAATGGCCCT
ATTATGTCAT ATAAATTTGA GGACGTGGAT AAGGGCTATA TGACTGACAC TAATTATGTT
ATCCCAAATA CGGCCCGCTG GATAGTTACC TATACTACCC CCATGCCCAA AGAAATGTAC
CGCACCGCTC CTTCGGGTGT TTGTTATGCC GCTAATATGA GCCGTTACCG CCTTAACCAC
GAGACTATGG CTTGTGTTCA GCAGTTCCTC AAGACATTGG GGTATCAGGG ACTCCAGTCT
GCCCCCTTCC CCAATGGTAT TTGTCCCTCC CCGGCTGTGG GTACTTTGTC CGGTCTGGGT
GAAATGGACA GAATAAACCA GTGTGTTATT CCTGAGGAAG GTGCGGTAGT TGGTATTTAC
AAATTTATTA CCGACCTGCC TTTGCCCGTC AGCAAGCCTA TAGATTTCGG GGCTTTCCGC
TTCTGCCACA GCTGCCGAAA GTGTGCGGAT ACCTGCCCGG CCAAGGCAAT ATCCTTTGAA
GAAGAGCCCA CCTGGGAACC GGCCGGCCCC TGGAGTACGG CTGGTAAGAG GGCTTATTTC
AAGAATGAAC CTGAGTGCAA GCTGTATCAG CACAGCACCG GGGCTACCTG CCAGATATGT
ACCGGCGTTT GTGTATTTAA TGTAAATACC AAAGCCATGA TACATGAGGT TGTTAAATCC
ACCCTATCCA CCACCGGTAT TTTTAACAGC TTCCTCTGGA AGGCTGATGT TGCCTTTGGC
TACGGCCATC ATGATGCGGC CGAATGGTGG GATCTTGACC TGCCCAGATA CGGCTTTGAT
ACCACTATGG GTGTCAGAGA CGGCGGGTAC GGAAAGTAA
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| Protein sequence | MNKFHTSLSR RDFMKGLGLA SASIGAVAAV SPIFHDLDEV ASADSSVNKR PWWVREVDKP
TIEIDWDKMA ALAIPTEGCH LPPLLAEFVG WDRVNTAMAQ GQTALKEGAQ KVGSREAISL
LDTAIQEASW PHFLTQAGWR EPVTPVLADP APIPELVGSI MTHETLGVAK WEGTPEENFA
LLKSAMRFFG AGQIASIELD TNVKKMLYPQ DASRMFFNGP IMSYKFEDVD KGYMTDTNYV
IPNTARWIVT YTTPMPKEMY RTAPSGVCYA ANMSRYRLNH ETMACVQQFL KTLGYQGLQS
APFPNGICPS PAVGTLSGLG EMDRINQCVI PEEGAVVGIY KFITDLPLPV SKPIDFGAFR
FCHSCRKCAD TCPAKAISFE EEPTWEPAGP WSTAGKRAYF KNEPECKLYQ HSTGATCQIC
TGVCVFNVNT KAMIHEVVKS TLSTTGIFNS FLWKADVAFG YGHHDAAEWW DLDLPRYGFD
TTMGVRDGGY GK
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