Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1522 |
Symbol | |
ID | 3229220 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1374234 |
End bp | 1375757 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637121080 |
Product | reductive dehalogenase, putative |
Protein accession | YP_182220 |
Protein GI | 57233757 |
COG category | [C] Energy production and conversion |
COG ID | [COG1600] Uncharacterized Fe-S protein |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR02486] reductive dehalogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.664066 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAAAGC TTCATAGTAC ACTATCCAGA CGTGACTTTA TGAAGGGATT GGGTCTCGCA GGGGCCGGGC TGGGTGCGGT AGCCGCAGCA GCGCCGGTAT TTCATGATGT GGATGAATTA ACGTCTTTCG GTTCCAATGT TAATAAATAT CCCTGGTATG TCAGGGAGAG GGAAATCAAG GACCCCACGG TAGAAATTGA CTGGAATACT CTTGAACGCC CGAATGCCAA CAATTTTAAA TCTCACCGCC GGCCTACTGC GGCCGAGTTT GAGGCTGCAG GTGTAATTGG CGGTTATATG ACTGACCTTG AAACACCTGA AGAAGCGCTG ACCCTGTATG ATTACTGTGA GAAGGAATTC CCGGGTTGGG ATAAAGGTTA TGCCGGTGCG GGTGATATAC GTTCCACTGC TTTGGATAAT GCCTGTAAAT TCATGATGAT GGGGCAGTGG CCGGCCGAAA TATATCAGGG CGGTAAGAGG ATTAATGTCC GCAATGCCAT ACTGGCAGCC GGCGGTACTG CCACTTTCAG TTCTTTCCTT GGCCCTCAGG CGGCTACTAC TATCCGACCG CAGGATTTTG GTGCCCAGAA ATGGCAGGGT ACACCTGAAG AAAACTTCAA AACCCTGCGA AACGCCTTCC GCTTCTTGGG GTGTCAGGAT GTAGGCTGTG CCGAACTTGA TAGCGATACT GTCAAATTCT TCCACAAGGT CAAGGGTGCC GGCAGCGGCT TCAACACCGG GGATGCAGGC GGTAAACAGA TTGCCTTTAA GGATATAGAT GAAGCATATG AAACTGATGA CGAATATGCC ATACCCAACA AATGCAAATA CATTATTACC TTTACCGCCC GCCAGAGCTT TGAGGGTACT CGCCGTCAGG CCGGTATTAC TGAGAGCTTC ACGGTGTGGT ATTGTTATGC CCGCTATGTC AAAATGATTT GCCATATGCA GGAATTCATC CGTGGTTTGG GTTATCAGTG CTTGAATATG AGCGGCTTGT ATTTCTCTAA TCCATTAGCC GTTATAACCG GTCTGGGTGA ACATGGCCGC ATGTCTTCCC CTGCCATTCA CCCCAAGAAC GGCACAACCA ACCGGGCTAG CGGATGGGCA CTTCTGACTG ATTTACCGGT AGCTCCCACC AAACCCATAG ACTTCGGGGC TTACAAGTTC TGTGAGACCT GCGGTATTTG TGCTGATGCC TGTCCCTTTG GTCTTATCCA GAAGGGCGAA TCCACCTGGG AAAATCCGGC AGCAGCTAAG AACGGGCTGG CTCAGGGTCA ATATAAAGGC TGGAGGACTA ATAATGCGGA TTGTCCCCAC TGCCCCACCT GTCAGGGTAC CTGTCCTTTT AACTCCACTT CCCAGTCCTT TATCCATGAC ATGGTCAAAG TAACCACCAC CAATATACCG GTTTTCAACG GTTTCTTTGC TAATATGGAA AGGTTTATGG AATACGGGCG GAAACCGCAG TGGGAATTCT GGGATATTGA ACAACCCACC TACGGTTTTG ATACCACGGC CTAG
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Protein sequence | MSKLHSTLSR RDFMKGLGLA GAGLGAVAAA APVFHDVDEL TSFGSNVNKY PWYVREREIK DPTVEIDWNT LERPNANNFK SHRRPTAAEF EAAGVIGGYM TDLETPEEAL TLYDYCEKEF PGWDKGYAGA GDIRSTALDN ACKFMMMGQW PAEIYQGGKR INVRNAILAA GGTATFSSFL GPQAATTIRP QDFGAQKWQG TPEENFKTLR NAFRFLGCQD VGCAELDSDT VKFFHKVKGA GSGFNTGDAG GKQIAFKDID EAYETDDEYA IPNKCKYIIT FTARQSFEGT RRQAGITESF TVWYCYARYV KMICHMQEFI RGLGYQCLNM SGLYFSNPLA VITGLGEHGR MSSPAIHPKN GTTNRASGWA LLTDLPVAPT KPIDFGAYKF CETCGICADA CPFGLIQKGE STWENPAAAK NGLAQGQYKG WRTNNADCPH CPTCQGTCPF NSTSQSFIHD MVKVTTTNIP VFNGFFANME RFMEYGRKPQ WEFWDIEQPT YGFDTTA
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