Gene DET1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1520 
Symbol 
ID3229230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1373221 
End bp1373697 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content39% 
IMG OID637121078 
ProductMarR family transcriptional regulator 
Protein accessionYP_182218 
Protein GI57233767 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.854006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT TTTTCCTTTT TAATTTCGAG AATAAAAACA TTGAGTTGTT CGGCATAATC 
ATGCGGACCA GGAATATTCT CTATAAACTT TCCAAACGGA ACCTGCATAG ATTGGATATC
AGCCCGGAAC AGTCAACTAT TCTTATGGTG GTAAAAAATA GTCCCACCGC CCCAACTCCC
ATCCAGATAT CCCGCCAGCT TCTTAGAGAA CCGCATACTA TTGCTATTAA TTTGAAACGA
ATGCAAAGCA AGGAACTGAT TACTCTGGAG CAGGATTCGG AATGGAAAAA CAGGATAAGG
GTAAAACTGA CTGAAAAAGG CCGCCAGCTT TGTGACGAAT CTTATGCCCC CGAATTTTTT
CAGGAAGTTT TTGAAGACCT GAACGAAAAT GAAACTAACC AATTGAAGAG CATTTTGGAG
AAACTTTTAG CAGCTAATAT AAAGAGACTG AAAACTAAAG ACCGGGAAGA TATATAG
 
Protein sequence
MSDFFLFNFE NKNIELFGII MRTRNILYKL SKRNLHRLDI SPEQSTILMV VKNSPTAPTP 
IQISRQLLRE PHTIAINLKR MQSKELITLE QDSEWKNRIR VKLTEKGRQL CDESYAPEFF
QEVFEDLNEN ETNQLKSILE KLLAANIKRL KTKDREDI