Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DET1494 |
Symbol | |
ID | 3229269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides ethenogenes 195 |
Kingdom | Bacteria |
Replicon accession | NC_002936 |
Strand | - |
Start bp | 1351334 |
End bp | 1352965 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637121054 |
Product | peptide ABC transporter, periplasmic peptide-binding protein |
Protein accession | YP_182194 |
Protein GI | 57233806 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0931394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTAAAA ATTGGAAAAA GTTTAAGAAA GTCTGGCTTA TCGGTCTGGC GGCAGTGATA TCGCTAAGCC TGTTTGCTGG CTGTGAGCAG ACAACACCCA ATGCAGATGA TACTGCCACG GCTATTACCC TGAAGGTCGG TTCTACCAAA CCCTTCAAGA CGACCAACCG CTTCAGTGAC TACTGGTACG GGGTGTTGAC TAACCTGACT ACCCATGACA GCCTGATAAG GCTGGGGGAT GACATGTCCA TCAAGCCCTG GCTGGCCAAA TCATGGACAG TGTCAGATGA CGCTAAGACA TTTGTTTTTA CCATTGCGGA TAATGCCTAC TGGCATGACG GCACTAAGCT GACGGCTGAA GATGTGGCCT TTTCTGTGGA ATACTACCGT GATTACATTG CTTCGGCCAG CTGGATGAAA GATGTAATAG CTGATGTCAG CTTTTCGGGG GATACAGTTA CCCTTTCTCT GTCCCGTCCC TACGGTAACC TTCTGACCGA ATTTATGACC TATTCCATTG TCCCCAAACA TATCTGGCAG GATGTGACTG ACCCGCTTAA GTATAACCAG ACGGATATGA CAGTCGGTTC GGGTCCGTTC GTATTTGAAA GTTTTGACCT TTCTTCCGGC AAGTTTATCT TCAAGGCTAA CGAAGACTAT TTTCAGGGCA AGCCCACCAT TGACCGCCTT GAGGTGGATA TTTACCAGAA TATGGACGCT TTGGTTTTAT CACTTGCCAA AGGTGATATA GATACCTGGT GGGATTACTC CGGGACTTTC CCCTATACCA GCATACCCGC CCTGATAAAG TCCAGTAAGG TGGACTTTGA GACCAGTACC TATCTGGGTG TGCCGTCTGC GCTGGGTTTT AACCTTGAAG ACGGCCCTGC CAGCGATATA AATGTCCGCA AGGCTATTGC GGCGGCTATA AACTACCAGC AGATAATAGA ATACTTTTAT GCGGGCTACG GTAGTGTGCC TACCACCGGT TTTGTTCCCC CCACCCACCC CAATTTCAAT GCTGACCTGC CTTCTCTGGC ATATAATCCT GCAGAGGCCA ATGCCCTGCT GGATGCGGCC GGACTGCTGG ATACAGATGG GGATGGTATC CGTGAGGATT CATCCGGACA GAATATTTCC CTGAGACTGC TGGCCAGATC TGACCAGTCT ACCAATATGC GTCTGGCTGA AATACTGCGG GATGCCCTGT CTGAGATTGG GCTTGGGGTA GAGATAAGAG CCCTGGACCT TTCGGCTTGG GCTTCGGTAA AAGATGCACT TGACTACGAT ATGGTTCTGT TCGGGGCTAC TCCTTGGGGT ACTCTGATGC ATGCCGGGCA TGGTTCGGGG TACTTTGACT CCAGACGTAC CGGTCAGGGT GTTTTGCACA ATCTGGACGC GGCTGAATAT CTGGCCGCCT GTGACGCCAG ACTGGCTACG GCTGACCCTG CCCAGCAGGC GGTGCTTGAC CTCCGGATAC AGGAACTTAC CGCCGAGTAT CTGCCGGGTA TTGCCCTGGC CTGGACTGAG AGTGTCTACC CTTACCGGCA GGGTTGGTCA GGCTGGGTGA TAGATAGTAT CTATGGCGGG GTGTTTAACG GATTTTCCTT CTTGAGTGTC CAGTCCCCCT AG
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Protein sequence | MIKNWKKFKK VWLIGLAAVI SLSLFAGCEQ TTPNADDTAT AITLKVGSTK PFKTTNRFSD YWYGVLTNLT THDSLIRLGD DMSIKPWLAK SWTVSDDAKT FVFTIADNAY WHDGTKLTAE DVAFSVEYYR DYIASASWMK DVIADVSFSG DTVTLSLSRP YGNLLTEFMT YSIVPKHIWQ DVTDPLKYNQ TDMTVGSGPF VFESFDLSSG KFIFKANEDY FQGKPTIDRL EVDIYQNMDA LVLSLAKGDI DTWWDYSGTF PYTSIPALIK SSKVDFETST YLGVPSALGF NLEDGPASDI NVRKAIAAAI NYQQIIEYFY AGYGSVPTTG FVPPTHPNFN ADLPSLAYNP AEANALLDAA GLLDTDGDGI REDSSGQNIS LRLLARSDQS TNMRLAEILR DALSEIGLGV EIRALDLSAW ASVKDALDYD MVLFGATPWG TLMHAGHGSG YFDSRRTGQG VLHNLDAAEY LAACDARLAT ADPAQQAVLD LRIQELTAEY LPGIALAWTE SVYPYRQGWS GWVIDSIYGG VFNGFSFLSV QSP
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