Gene DET1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1474 
Symbol 
ID3229304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand- 
Start bp1333144 
End bp1334304 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content46% 
IMG OID637121034 
Productphage integrase family site specific recombinase 
Protein accessionYP_182174 
Protein GI57233840 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.0051357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGAG CAATAATCAA ACGAGGTAAC TCTTACCGGG TTAAGATCTC TCTGGGCAAG 
GATTCAGCAA GCGGCAAGTA TCTTTCCCAT TATGAAACAG TCAAAGGCAA CAAGAAGGCG 
GCCGAGAAGA GACTGAACGA GCTTATACAT CAGTTTGACT CCGGAACTTT TGTTAAGCCG 
GGCAAATCTA CCATGTATGA GTATATGCAA TCCTGGCTTA ATGACTACTG TAAGCCCAAT 
CTCTCACCCA GGACTGTTGA GTTGTATTCT TATATCAGCA CCAAGCATAT AATCCCCACC 
TTGGGTAATA TACCCATTGT GGAACTTAAA CCCCAGCACC TGCAGCATCT GTATGCTGAT 
AAGCAGTCTT TCGGCCTGAG TAACCGGACT GTCCAGATTA TTCATGTAGT ACTTCATAAA 
GCCCTCAAGA ATGCAGTTAA GACTGGGCTC TTAAGTCGGA ATATAGCTGA GGCGGTTGAT 
GCTCCCAAGA TCCAGCGGCA TGAAATGCAG GTTATGAATG AATCTGATAT GCAGGTATTG 
CTGGAAAAGG CTAAGGAGAC ACCCTATTAT GCTCTGTTTT ATACCAGCCT GTTTACCGGA 
ATGAGAAGAG CTGAATGTCT GGCTCTGAGG TGGAGTGATA TTGATCTGAT ACTCTGCCAG 
GTCTATGTTT TAAGGAGTAT GCAATATGTT CAGGATGCTG ATCTGGGAAA ACGGATAACT 
TTCAAAGAGC CTAAGACCAG CAAGAGCCGA AGGCAGATAG CCCTTTCACC CAGTAATGTC 
ATTATCCTTA GGGAGCACTA TCAGGATCAA AGCGAGTTGA GAAAGACTCT GAACCTGCCT 
GGCTTGACCG ATAGTGATTT GGTATTCAGT CATTATGACG GGTCTCCCCT GCTTCCCAAC 
AGCGTAACCC ATGCCTGGAT TAAACTGGCA AGGCGGTGCG GTTTGAACGG CATACGCCTG 
CATGATGCCA GGCATACCCA TGCTTCTCTG CTACTTAAAC AGGGAGTCCA TCCCAAAATT 
GTTCAAGAGA GGCTGGGCCA TGGCTCAATC CAGATTACCC TGGATACTTA CAGCCACGTA 
GCCCCTGGCC TGCAACAAGC TGCTGCCAGC AAGTTTGATG ATATTGTTTT GGCTGGGAAA 
AGAGAACTTG TTGAAAAATA A
 
Protein sequence
MRGAIIKRGN SYRVKISLGK DSASGKYLSH YETVKGNKKA AEKRLNELIH QFDSGTFVKP 
GKSTMYEYMQ SWLNDYCKPN LSPRTVELYS YISTKHIIPT LGNIPIVELK PQHLQHLYAD 
KQSFGLSNRT VQIIHVVLHK ALKNAVKTGL LSRNIAEAVD APKIQRHEMQ VMNESDMQVL 
LEKAKETPYY ALFYTSLFTG MRRAECLALR WSDIDLILCQ VYVLRSMQYV QDADLGKRIT 
FKEPKTSKSR RQIALSPSNV IILREHYQDQ SELRKTLNLP GLTDSDLVFS HYDGSPLLPN 
SVTHAWIKLA RRCGLNGIRL HDARHTHASL LLKQGVHPKI VQERLGHGSI QITLDTYSHV 
APGLQQAAAS KFDDIVLAGK RELVEK