Gene DET1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDET1474 
Symbol 
ID3229304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides ethenogenes 195 
KingdomBacteria 
Replicon accessionNC_002936 
Strand
Start bp1333144 
End bp1334304 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content46% 
IMG OID637121034 
Productphage integrase family site specific recombinase 
Protein accessionYP_182174 
Protein GI57233840 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0051357 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGGAG CAATAATCAA ACGAGGTAAC TCTTACCGGG TTAAGATCTC TCTGGGCAAG 
GATTCAGCAA GCGGCAAGTA TCTTTCCCAT TATGAAACAG TCAAAGGCAA CAAGAAGGCG
GCCGAGAAGA GACTGAACGA GCTTATACAT CAGTTTGACT CCGGAACTTT TGTTAAGCCG
GGCAAATCTA CCATGTATGA GTATATGCAA TCCTGGCTTA ATGACTACTG TAAGCCCAAT
CTCTCACCCA GGACTGTTGA GTTGTATTCT TATATCAGCA CCAAGCATAT AATCCCCACC
TTGGGTAATA TACCCATTGT GGAACTTAAA CCCCAGCACC TGCAGCATCT GTATGCTGAT
AAGCAGTCTT TCGGCCTGAG TAACCGGACT GTCCAGATTA TTCATGTAGT ACTTCATAAA
GCCCTCAAGA ATGCAGTTAA GACTGGGCTC TTAAGTCGGA ATATAGCTGA GGCGGTTGAT
GCTCCCAAGA TCCAGCGGCA TGAAATGCAG GTTATGAATG AATCTGATAT GCAGGTATTG
CTGGAAAAGG CTAAGGAGAC ACCCTATTAT GCTCTGTTTT ATACCAGCCT GTTTACCGGA
ATGAGAAGAG CTGAATGTCT GGCTCTGAGG TGGAGTGATA TTGATCTGAT ACTCTGCCAG
GTCTATGTTT TAAGGAGTAT GCAATATGTT CAGGATGCTG ATCTGGGAAA ACGGATAACT
TTCAAAGAGC CTAAGACCAG CAAGAGCCGA AGGCAGATAG CCCTTTCACC CAGTAATGTC
ATTATCCTTA GGGAGCACTA TCAGGATCAA AGCGAGTTGA GAAAGACTCT GAACCTGCCT
GGCTTGACCG ATAGTGATTT GGTATTCAGT CATTATGACG GGTCTCCCCT GCTTCCCAAC
AGCGTAACCC ATGCCTGGAT TAAACTGGCA AGGCGGTGCG GTTTGAACGG CATACGCCTG
CATGATGCCA GGCATACCCA TGCTTCTCTG CTACTTAAAC AGGGAGTCCA TCCCAAAATT
GTTCAAGAGA GGCTGGGCCA TGGCTCAATC CAGATTACCC TGGATACTTA CAGCCACGTA
GCCCCTGGCC TGCAACAAGC TGCTGCCAGC AAGTTTGATG ATATTGTTTT GGCTGGGAAA
AGAGAACTTG TTGAAAAATA A
 
Protein sequence
MRGAIIKRGN SYRVKISLGK DSASGKYLSH YETVKGNKKA AEKRLNELIH QFDSGTFVKP 
GKSTMYEYMQ SWLNDYCKPN LSPRTVELYS YISTKHIIPT LGNIPIVELK PQHLQHLYAD
KQSFGLSNRT VQIIHVVLHK ALKNAVKTGL LSRNIAEAVD APKIQRHEMQ VMNESDMQVL
LEKAKETPYY ALFYTSLFTG MRRAECLALR WSDIDLILCQ VYVLRSMQYV QDADLGKRIT
FKEPKTSKSR RQIALSPSNV IILREHYQDQ SELRKTLNLP GLTDSDLVFS HYDGSPLLPN
SVTHAWIKLA RRCGLNGIRL HDARHTHASL LLKQGVHPKI VQERLGHGSI QITLDTYSHV
APGLQQAAAS KFDDIVLAGK RELVEK