| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1462 |
|---|
| Symbol | |
|---|
| ID | 3229191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides ethenogenes 195 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002936 |
|---|
| Strand | - |
|---|
| Start bp | 1318473 |
|---|
| End bp | 1319288 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 637121022 |
|---|
| Product | RadC family DNA repair protein |
|---|
| Protein accession | YP_182165 |
|---|
| Protein GI | 57233728 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.457457 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC CCAAGAAGAC TGAGGATACC CCATCTGTTT CAACCGCTAA TCCGAACGCC
GGGCATCGCC AGCGTCTGCG TGAGCGTTTC CTTAAGGCCG GTCTGGACGG GCTGAATGAT
TATGAAGTGG TAGATCTGCT GCTTACCTTA GGGACTCCCC GCCGTGATTG CAAGCAAGCG
GCCAAAGAGG CCATAAAACA CTTCGGCAGC CTTAGGGCGG TGCTGGAAGC CTCCCCTGCC
GAACTTTCAA GCATAAAGGG AATAGGCGAG GTCAACTCCA TGGCCCTTAC CCTTATCAGG
GAAGTATCCC GGCGCTACCT TAAGGACGGG ATTATGGAAA AACCGGTCTG CAATACCGCC
CAGCAGGTGT TTGATTACCT GTATTGCGCC ATGCGGGGTC TGAAAAAAGA GGTTTTCAAG
GTAATATATC TGGACAGCCA GCACCGGGTG CTGGAGGTGG CAGACCTTTT TAGCGGAACA
GTGGCCAGCG GTTGTGTTAT CCCCCGGGAG GTGATTGGGG CGGCTATTTC CCAAAATGCC
TCCGCCCTTA TTTTTGTTCA TAACCACCCT TCCGGTAAGA CCGAGCCTTC GCAGGCAGAT
AAAGACCTGA CCCGTGAGCT GGTGTATGCC GCCATGGTGA TGAAAATACG GGCTTTAGAC
CATATTATTA TCGGGGATAA CTGCTATTTC AGTTTTGCGG CTGCCGGTCT TATGGGAGAG
TATGAAACAG GTTTTTTAAA TTTGAAACTG AAACATGTTT CCGAAGCAAA ACGTCATATA
TACCGGGCAG AACTGTTCGG GGGAAACCCG GAGTAA
|
|---|
| Protein sequence | MNPPKKTEDT PSVSTANPNA GHRQRLRERF LKAGLDGLND YEVVDLLLTL GTPRRDCKQA
AKEAIKHFGS LRAVLEASPA ELSSIKGIGE VNSMALTLIR EVSRRYLKDG IMEKPVCNTA
QQVFDYLYCA MRGLKKEVFK VIYLDSQHRV LEVADLFSGT VASGCVIPRE VIGAAISQNA
SALIFVHNHP SGKTEPSQAD KDLTRELVYA AMVMKIRALD HIIIGDNCYF SFAAAGLMGE
YETGFLNLKL KHVSEAKRHI YRAELFGGNP E
|
|---|
| |