Gene DET1459 details

Gene Information

• Locus tag: DET1459
• ID: 3229194
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1316911
• End bp: 1317450
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637121019
• Product: ribosomal subunit interface protein, putative
• Protein accession: YP_182162
• Protein GI: 57233731
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1544] Ribosome-associated protein Y (PSrp-1)
• TIGRFAM ID: [TIGR00741] ribosomal subunit interface protein

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.000334048
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGATTC AGATTACCAC CAAGAATTGC CGTCTGGACA ACCGCACCCG CAGTTATATC 
CAACGCAAAA TGGGACGGAT AACCCGGATA CTGCCCCAGA TTTCCGAATT CAGGATAGAG 
CTTGACGAGG AACAAACCCG CTCACAGGCA GACCATTTTA TCCTTAAAGC CACGCTCAAT 
ACCGGTACAG ACGTACTTTA CGCTGAAGAA CGGGCAGAAA ACCTGCTGAC CGCCGCTGAC 
CGGGCGGTAG AGGTGCTTAA CCAGCAGATT GACCATGCCA AAGGCAAGAT GGAAGTAAAA 
GCACGCAATC GTGAAAGTAT ACGCCTCAGT CAGCCGGATA CATTTTCATC TTCCAAAGAG 
CCTCTAATCC GAAGACGCAA ACAAGAGGCC AAACCCATGA CCGTAGAAGA AGCGGTCAAC 
CAGATGAACC TATCAGGTGA AGAATACCTG CTCTTTTTAG GCCCGGACAC CAAACGGGTA 
AACCTGCTCC GCCGCTTTGC TGACGGCAAG TTTGAGCTGG TTGAACCCGT ACCGGAGTAG 

 

Protein sequence

MEIQITTKNC RLDNRTRSYI QRKMGRITRI LPQISEFRIE LDEEQTRSQA DHFILKATLN 
TGTDVLYAEE RAENLLTAAD RAVEVLNQQI DHAKGKMEVK ARNRESIRLS QPDTFSSSKE 
PLIRRRKQEA KPMTVEEAVN QMNLSGEEYL LFLGPDTKRV NLLRRFADGK FELVEPVPE