Gene DET1434 details

Gene Information

• Locus tag: DET1434
• Symbol: hypD
• ID: 3229229
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: +
• Start bp: 1304937
• End bp: 1306031
• Gene Length: 1095 bp
• Protein Length: 364 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637120994
• Product: hydrogenase expression/formation protein HypD
• Protein accession: YP_182142
• Protein GI: 57233766
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0409] Hydrogenase maturation factor
• TIGRFAM ID: [TIGR00075] hydrogenase expression/formation protein HypD

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.736513
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATTTCA TAGAGGAATT CCGCAGCAGC CAGTCAGGAC GCACCCTGCT GGAATATATA 
AACAAACGTT CCACCAAGCC TGCCCGCTTT ATGGAGTTTT GCGGCGGGCA TACCGTAGCC 
ATTTTCCGCT ACGGCATCCG CCAGCTGCTG CCGCCCCATA TTGAAATGCT GTCAGGGCCG 
GGCTGCCCTG TTTGTGTAAC CTCTACCGCC GACCTGGACA AAGTCATAGC CCTGTCCAGG 
CTGCCAGGGG TTATAATCTG CTCATTCGGA GACCTGCTAA GGGTTCCCTC CAGCCGCCAA 
AGCCTGCTGG AAGTGCGGGC GGAAGGGGCG GACGTACGTA TTGTCTACTC TACCATGGAC 
GCACTGGAGA TAGCCCGCCA GAACCCCTTG AAAAAGGTTA TCTTTGTGGG TATAGGTTTT 
GAAACCACCG CCCCCACCAT TGCCGCTTCG GTAATACAGG CTCGTAATCA GGGGCTTGCT 
AATTATTATG TAATGTCAAT TCACAAAATA ACCCCTCCCG TTATGCGGGC GATACTGGAT 
GCAGGTGAAA CCCGCCTTTC GGGCATAATC TGCCCCGGCC ATGTTTCTTC TATTACCGGC 
AGCAATGCCT GGGAATTTAT TCCAGAGGAA TACCATCTGG CTTGTGCCGT GTCAGGCTTT 
GAAAGCCTGG ACATACTCTA CTGTGTTAAG TCTCTGGTAG ACCAGGTGGA AGACGCAACT 
CCCCGTCTGG ACGTCAGCTA TTCACGGGCA GTCAAACCTG AAGGCAATAC TGCCGCCCTT 
AAGATTATGG ATGAAGTATT TGATATCTGC CCGGCCAACT GGCGGGGGAT AGGTATTTTA 
CCCCAAAGCG GCCTCTGCCT GCGGCCTGAA TTTGCCGCTT TTGATGCCGA AAAAAACTTT 
GAGATAAAAC TTTCCGAGCC CAGCCGCGAA ACACCCGGCT GTCTGTGCGG TGAAATTATC 
AAAGGCACCC GGACACCTCT GGAATGCAAG CTTTTTTCAA AGGTCTGCAC CCCGGAAAAC 
CCGGTCGGGC CGTGCATGGT CTCTTCCGAG GGCACCTGCG CCGCCTATTA CCACTACGGA 
GGCAAACTTG GATAA 

 

Protein sequence

MNFIEEFRSS QSGRTLLEYI NKRSTKPARF MEFCGGHTVA IFRYGIRQLL PPHIEMLSGP 
GCPVCVTSTA DLDKVIALSR LPGVIICSFG DLLRVPSSRQ SLLEVRAEGA DVRIVYSTMD 
ALEIARQNPL KKVIFVGIGF ETTAPTIAAS VIQARNQGLA NYYVMSIHKI TPPVMRAILD 
AGETRLSGII CPGHVSSITG SNAWEFIPEE YHLACAVSGF ESLDILYCVK SLVDQVEDAT 
PRLDVSYSRA VKPEGNTAAL KIMDEVFDIC PANWRGIGIL PQSGLCLRPE FAAFDAEKNF 
EIKLSEPSRE TPGCLCGEII KGTRTPLECK LFSKVCTPEN PVGPCMVSSE GTCAAYYHYG 
GKLG