Gene DET1398 details

Gene Information

• Locus tag: DET1398
• Symbol: dnaJ
• ID: 3229311
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides ethenogenes 195
• Kingdom: Bacteria
• Replicon accession: NC_002936
• Strand: -
• Start bp: 1264829
• End bp: 1265899
• Gene Length: 1071 bp
• Protein Length: 356 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 637120959
• Product: co-chaperone protein DnaJ
• Protein accession: YP_182107
• Protein GI: 57233847
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain
• TIGRFAM ID: [TIGR02349] chaperone protein DnaJ

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0366797
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAATA AAAGAGATTA TTACGAAGTA CTGGGTATTG AACGCAGCGC TTCTGACGAA 
GATATAAAAA AGGCCTTCCG CAAGATGGCT ATGAAGCATC ATCCTGACCG TAACCACGAG 
GATGGCGCTG CCGAAAAATT CAAAGAAATA AACGAAGCCT ACGAAGTCCT TTCCAATCCC 
GAAAAAAGGG CGGCCTATGA CCGGTTTGGT TTCAGCGCCG GATCAGATGC CTTTGGTCAG 
GGCGGCTTTG AAAACTTTGA TTTCGGCGGT TTGGGCAGTA TTTTTGAGAC ATTTTTTGGC 
GGTGCTACCC AGAGTGCCAA GCGCGGCCCC CGCCGCGGGC CGGATATGTC TTATGATATA 
CGGATAACTC TTGAAGAAGC CGCAACCGGG GTTGAAAAAG AAATTACCAC CGAAAGGCTT 
GAATACTGCT CTGAGTGCAG CGGTACGGGA GCTAAAGCCG GCACTTCACT TGTAAAATGT 
ACCAACTGTA ACGGTACCGG GCAGGTTTAT CAGGTGCAAA AGAGTGTTTT CGGGCGTTTT 
ACCAGCGTAA CCCCCTGTCC CAAATGCCGG GGTGAGGGGA CTATCATCGG CGAACCCTGT 
GCCAAGTGCC GGGGTACCGG TAAAGAATAT GTCAAGCGGA CTGTTCAGGT AAAGATACCT 
GCCGGGGTGG CAGACGGCAA CCAGATACGC CTTAACGGCT ACGGCGGTGT AGGTGATAAG 
GGCGCTTCCG CCGGTGATGT GTATATAAAC GTAAGCATTG CCTCACATGC GGATTTCAAA 
CGTGACGGTG ATGATGTTAT TTATGAACTT GAGATAAATT TTGCCCAGGC GGCTTTGGGC 
ACTGAAGTAA ATGTGCCGGG GCTTAGCACC TCTCACAAGC TGAAAATTCC GTCAGGCAGT 
CAGAACGGCA AGTACTTTGT GCTGAAGGGC AAGGGTATTC CCCATCTGAA CCGCTTTGGC 
AGCGGTGACG AAATGGTGCA CCTGAACGTT GTTACTCCTG AGAAGCTCAG CCGTAAACAG 
AAACAGCTCT TTGAGGAGCT GGAGAAGTCT TTCGCCGAGG ATAAAAAGTA G 

 

Protein sequence

MANKRDYYEV LGIERSASDE DIKKAFRKMA MKHHPDRNHE DGAAEKFKEI NEAYEVLSNP 
EKRAAYDRFG FSAGSDAFGQ GGFENFDFGG LGSIFETFFG GATQSAKRGP RRGPDMSYDI 
RITLEEAATG VEKEITTERL EYCSECSGTG AKAGTSLVKC TNCNGTGQVY QVQKSVFGRF 
TSVTPCPKCR GEGTIIGEPC AKCRGTGKEY VKRTVQVKIP AGVADGNQIR LNGYGGVGDK 
GASAGDVYIN VSIASHADFK RDGDDVIYEL EINFAQAALG TEVNVPGLST SHKLKIPSGS 
QNGKYFVLKG KGIPHLNRFG SGDEMVHLNV VTPEKLSRKQ KQLFEELEKS FAEDKK